Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi622g00018 ATGCCAAGGCCTGGGATGATGGTCATTCCTAGGATGGGAGCTGGATTGCATGCAATGGAGAGCAGCAGTTACTATGAACCTCATCAGGACCATAGAGGAGCTGAGAGCTATTGCATTTGTGAGAGACAGTTAGGAGAGCCATTAAGGGAGGATGGACCGATTCTAGGGATGGAATTTGATTCCTTGCCACCGG 193 0.4974 MPRPGMMVIPRMGAGLHAMESSSYYEPHQDHRGAESYCICERQLGEPLREDGPILGMEFDSLPP 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi622g00018 64 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 18 64 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi622g00018 Sebi-Chr622 513878 514070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi622g00018 38 64 Homeobox Transcription Factor Family AT1G28420 85.185 1.76e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi622g00018 - - lja:Lj0g3v0211739.1 90.1225