Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi622g00014 ATGCTTGCGGTGTCACCTTTGAGGAGCACCAAAGATGAAATCAAAGAAGAGACGGAGAGCTTTTCGATTGGAACTTCAACAACCGCTGATGTCATCGGCGACTTCGGTGACTTTTCCGATGGGAGTTTATTGGAGAGCATCAACTTCGACGACCTCTTTGTCGGCATCAGCGTCGACGGTGATGTGTTGCCGGATTTGGAAATGGATCCGGAGATTTTCGCCGAGTTTTCCAAAGATGACGAAGATAAAACGGCAACAACAGAAACTTCTTCTGCTTCGGGTCAAGGTTCGGGGTCAACGAGCCGAGGGGAAGAGATAGTGAGTAAAAGGGATGAATCGGTGGTGGTGAATCCGTCGCCAAAGGATGGTGGAAAAGGAAGAAAATCATCATCAGCTCAAGCAAAGAATCCTCAAGGGAAGAGAAAAGTCAAGGTGGATTGGACACCAGAATTGCATAGGCGATTTGTGCAAGCTGTGGAACAGTTAGGAGTGGATAAGGCGGTGCCTTCAAGGATTTTAGAGATTATGGGAATTGATTGTCTCACTCGTCATAACATTGCGAGCCACCTTCAAAAATATAGATCCCATAGAAAACATTTGTTAGCGCGTGAAGCTGAAGCAGCAAGCTGGAATCAAAAGAGACAACTGTATGGTGCAGGAGGGAAGAGAGAGGTGAGTCCATGGCTAGCACCAACCATGGGTTTCCCTCCCATGACTCCTACAATGCACCATTTTAGACCCTTACATGTATGGGGTCATCCTTCGATGGACCAGTCATTTATGCACATGTGGAATAAACATCTGCCACATTCGCCGCCGCCCTCATGGCCACCAGCGGCGGCTCCTCCACCACGTCAAGACCCTTCATTTTGGCACGGTCAGCACCAACGGACTCCAAACGCACTAATCCCAGGAACACCTTGTTTTCCACAACCTCTGACAACAGCGAGATTTGGATGTCCACCTGTCCCTGGCATCCCACCCCATGCCATGTACAAAGCAGATCACGGCATTGGCGTCCCTGGTCCCCGACCCTTCTCCGATTTCCATCCGTCAAAGGAGAGCATAGATGCAGCTATTGGAGATGTTTTATCAAAACCATGGCTGCCGCTGCCACTTGGACTTAAGGCTCCAGCACTTGAAAGTGTACTGGGTGAATTACAGAGACAAGGAGTTTCAAGCATTCCACCCTCTACTTGTGCTTGA 1206 0.4909 MLAVSPLRSTKDEIKEETESFSIGTSTTADVIGDFGDFSDGSLLESINFDDLFVGISVDGDVLPDLEMDPEIFAEFSKDDEDKTATTETSSASGQGSGSTSRGEEIVSKRDESVVVNPSPKDGGKGRKSSSAQAKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWNQKRQLYGAGGKREVSPWLAPTMGFPPMTPTMHHFRPLHVWGHPSMDQSFMHMWNKHLPHSPPPSWPPAAAPPPRQDPSFWHGQHQRTPNALIPGTPCFPQPLTTARFGCPPVPGIPPHAMYKADHGIGVPGPRPFSDFHPSKESIDAAIGDVLSKPWLPLPLGLKAPALESVLGELQRQGVSSIPPSTCA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi622g00014 401 MobiDBLite consensus disorder prediction 1 21 - -
Sebi622g00014 401 FunFam Two-component response regulator 138 201 - -
Sebi622g00014 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 198 IPR017930 -
Sebi622g00014 401 MobiDBLite consensus disorder prediction 87 103 - -
Sebi622g00014 401 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 86 IPR044825 GO:0003700|GO:0045893
Sebi622g00014 401 SUPERFAMILY Homeodomain-like 140 199 IPR009057 -
Sebi622g00014 401 Pfam Myb-like DNA-binding domain 145 194 IPR001005 -
Sebi622g00014 401 Gene3D - 139 200 - -
Sebi622g00014 401 NCBIfam myb-like DNA-binding domain, SHAQKYF class 142 196 IPR006447 GO:0003677
Sebi622g00014 401 MobiDBLite consensus disorder prediction 76 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi622g00014 Sebi-Chr622 364805 368733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi622g00014 1 272 G2-like Transcription Factor Family AT5G44190 49.135 1.22e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi622g00014 Myb_DNA-binding 5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi622g00014 - - aprc:113858121 551.977