Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi621g00011 ATGGCTTTGGTTTCCGTCGGTTTCCATAAGGTGGCAGACCTGTGTGGGAGAAGGGAAAATTGGAGGTTGTGTGTGAAACTCATCAGGCTCTGGAAGATGTCTGCAGTGGCCACCCGTGATGATCCCTTCGCCATGCATATGTTGTTTGTTGATCAGCAGGTTGTGTTTATCCTCAAGCCTCCTGTTACATTTGAATATCATTTGTTAATTTGCCTTCTTCTTTCGCTGTTTCTGTTACCCTGGGAAGTATACAATCTCAGCAATTTCTCTGTTTCTCGGAACGGGGGGAAGTTCAGAGCAACCCATCATGACTACAAGCTCACCTTCAATGCTAATACAAAGATTGTTCCCTGTCCCAGCGTTGCCATTCCAGACACTGGTTTGAGTCTCGTCAAGACATCTGAGATCATGAAGACTAAAGGATCTTCTCAGTACCTCATCGATTTCATGGCAATAGTCACTGGAATATCTGAAGAGTTGACCCTCAACAAGGAAAACAGACAAACCCGTCTGATGCTCATCGATATGGTTGATGAAATGGGGAAGATAAGATGTGCCATTTTTGGACAGCTCATTGATACTGTGAAGGGCTTTCTGACTCTTCCTCGGTGCGGTTTGCCTGTTCTGATTATCCACCTTGCTCGCGTTAATTTATATAGAGGGGAAGTTGGGATTCAAAACCTCATGAATGCCTCCAAGTTGTTGTGGAATCCTGAAATTCCAGTGGCTGTGGAGTTCAAAAATGGGCTCGCTGTTCATGAGATCGAGACAGACGTTGCAATATCCCTCATTTCTGATAACTCTCGTCCTATTTCTATACGGGAGCAATTCCTGAAAATGTTCCCTAGGCGTCGTGTGGGGGACTTGAACCACCTTCTAGAGGATGGGACTTATATAGTACATGGAACAATCACAGAGGTCTTCCAGGATGACGATTGGTGGTACATTGCATGCTCCTGCATGAAGGCAGTCGATTTCACTCGAGGCTTCCCATATTGTGATGGTTGCAAGCGAGAGGTCTATGACATGTCACCGAG 1037 0.4561 MALVSVGFHKVADLCGRRENWRLCVKLIRLWKMSAVATRDDPFAMHMLFVDQQVVFILKPPVTFEYHLLICLLLSLFLLPWEVYNLSNFSVSRNGGKFRATHHDYKLTFNANTKIVPCPSVAIPDTGLSLVKTSEIMKTKGSSQYLIDFMAIVTGISEELTLNKENRQTRLMLIDMVDEMGKIRCAIFGQLIDTVKGFLTLPRCGLPVLIIHLARVNLYRGEVGIQNLMNASKLLWNPEIPVAVEFKNGLAVHEIETDVAISLISDNSRPISIREQFLKMFPRRRVGDLNHLLEDGTYIVHGTITEVFQDDDWWYIACSCMKAVDFTRGFPYCDGCKREVYDMSP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi621g00011 345 Gene3D - 278 345 IPR012340 -
Sebi621g00011 345 SUPERFAMILY Nucleic acid-binding proteins 7 121 IPR012340 -
Sebi621g00011 345 Gene3D - 122 257 IPR012340 -
Sebi621g00011 345 SUPERFAMILY Nucleic acid-binding proteins 129 251 IPR012340 -
Sebi621g00011 345 Gene3D - 8 120 IPR012340 -
Sebi621g00011 345 Pfam Domain of unknown function DUF223 85 138 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi621g00011 Sebi-Chr621 405851 407504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi621g00011 82 339 Core DNA Replication Machinery Family AT5G08020 21.691 6.36e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi621g00011 - - lja:Lj6g3v0884310.1 248.054