Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi621g00007 ATGGGAGGTGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGTCCAGACACTCGACACCAAGTCATCTATGACAAGTGCTGAAGTGAGTCAGGATGGTCGTTATATTACAACTGCTGATGGTTCTACCGTTAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGATATGCCCTGCACTGTGGAATCAGCATCACTGGAGCCCAAGTATGGGAACAAATTCATTGCTGGGGGAGAAGACATGTGGGTTCATGTTTTTGATTTCCATACTGGCAATGAGATTGCATGCAACAAGGGACATCATGGTCCTGTACACTGTGTCCGTTTCTCTCCTGGAGGAGAATCATATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGTCCGTTGACGACTCATGAAGAACAATCAGAGGCTTAA 438 0.4521 MGGVRLWDVRSGKIVQTLDTKSSMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCTVESASLEPKYGNKFIAGGEDMWVHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTTHEEQSEA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi621g00007 145 Pfam WD domain, G-beta repeat 98 131 IPR001680 GO:0005515
Sebi621g00007 145 Pfam WD domain, G-beta repeat 14 48 IPR001680 GO:0005515
Sebi621g00007 145 ProSiteProfiles Trp-Asp (WD) repeats profile. 100 132 IPR001680 GO:0005515
Sebi621g00007 145 Gene3D - 2 144 IPR015943 GO:0005515
Sebi621g00007 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 3 136 - -
Sebi621g00007 145 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 100 132 - -
Sebi621g00007 145 SMART WD40_4 93 132 IPR001680 GO:0005515
Sebi621g00007 145 SMART WD40_4 11 48 IPR001680 GO:0005515
Sebi621g00007 145 SMART WD40_4 51 90 IPR001680 GO:0005515
Sebi621g00007 145 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 2 134 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi621g00007 Sebi-Chr621 120509 121357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi621g00007 2 130 Eukaryotic Initiation Factors Gene Family AT2G46290 28.571 6.74e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi621g00007 K13137 - gmx:100782712 286.574