Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi621g00002 ATGTACAGCAACTTAACTCGAGTGGTGATGGTCTCCTGGCTCTTTCTAGTTTTGATTCTTAACTCAAGCTACACTGCTAGTCTTTCCTCAATGCTCACAGTTAAACAACTGCGACCAAATGTCACAGACATTGAGTGGCTGAGGAGGAACAACGTGAAGATTGGTTGCGATGGTGACTCATTTGTTAGGTCATTCCTAGAGAAAGTAGAAAGGTTCAAGTCGGAGAACATCATAAACATTACTGATGAATACAAGTTTGATGATGCATTCGCAAATAATAGCATAGCAGTTGCCTTTCTTGAACTCCCATATGAAAAAGTATTCATTAGTGAATACTGCAGGAGATACAATGGTTCCACTCCCAGAACTAGATTTGGAGGATTAGGCTTT 390 0.4026 MYSNLTRVVMVSWLFLVLILNSSYTASLSSMLTVKQLRPNVTDIEWLRRNNVKIGCDGDSFVRSFLEKVERFKSENIINITDEYKFDDAFANNSIAVAFLELPYEKVFISEYCRRYNGSTPRTRFGGLGF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi621g00002 130 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 130 IPR015683 -
Sebi621g00002 130 Pfam Ligand-gated ion channel 3 59 IPR001320 GO:0015276|GO:0016020
Sebi621g00002 130 Gene3D - 2 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi621g00002 Sebi-Chr621 45594 45983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi621g00002 6 130 Ion Channels AT5G11210 37.984 7.19e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi621g00002 - - lja:Lj6g3v2006160.1 236.113