Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi620g00027 ATGGGAATCTGTCATGGAAAGGCTATTGAGACCCAACAAAGTGAAGGAGAAAACACAGTGTTCCCTGGTGAGGTGCCAAGTTCACATGCTGCAACTAAATCCCCATCAAAGTTTCCATTCTACACCCCAAGCCCTTTGCCAAGTTTGTTCAAGAACTCACCAGCATATTCAAACTCAAACTCAAGTGTGAGTTCAACCCCTTTACGCTTCTTCAAACGCCCTTTCCCTCCTCCTTCCCCTGCAAAGCACATTAAAGCTTTGCTTGCTCGCCGCCATGGTTCTGTTAAGCCAAACGAGGCCTCTATTCCTGAAGGCAGTGAGTGTGAGGAGGTTGGGTTGGATAAGAGTTTTGGGTTCTCTAAGCAGTTTGTAAGCCATTATGAGCTTGGTGAAGAGGTGGGGCGTGGTCATTTTGGATATACTTGCTCTGCTAAGGCCAAGAAGGGTGCCTTCAAAGGCCTTGATGTGGCTGTCAAAGTCATTCCAAAATCTAAGATGACAACAGCAATTGCCATAGAGGATGTAAGGAGAGAAGTGAAGATATTGCGTGCTCTAACAGGACATAAGAATCTGGTGCAATTCTATGAAGCCTATGAAGATGATGACAATGTTTATATAGTTATGGA 626 0.4489 MGICHGKAIETQQSEGENTVFPGEVPSSHAATKSPSKFPFYTPSPLPSLFKNSPAYSNSNSSVSSTPLRFFKRPFPPPSPAKHIKALLARRHGSVKPNEASIPEGSECEEVGLDKSFGFSKQFVSHYELGEEVGRGHFGYTCSAKAKKGAFKGLDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYIVM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi620g00027 208 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 208 - -
Sebi620g00027 208 ProSiteProfiles Protein kinase domain profile. 127 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi620g00027 208 Pfam Protein kinase domain 127 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi620g00027 208 SUPERFAMILY Protein kinase-like (PK-like) 119 208 IPR011009 -
Sebi620g00027 208 Gene3D Phosphorylase Kinase; domain 1 118 208 - -
Sebi620g00027 208 MobiDBLite consensus disorder prediction 11 37 - -
Sebi620g00027 208 ProSitePatterns Protein kinases ATP-binding region signature. 133 159 IPR017441 GO:0005524
Sebi620g00027 208 FunFam CDPK-related kinase 1 120 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi620g00027 Sebi-Chr620 501042 502511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi620g00027 1 208 EF-hand Containing Proteins AT3G50530 62.445 1.28e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi620g00027 Pkinase 2.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi620g00027 K13412 - vum:124833383 333.569