Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi61g00058 ATGGATGATTACAACTTATTTCCTGATGAATGCCACTTGAACTTTCTTAATGTTGATGATGAAGAGTTTCTTTCACATGACATAGCTAGTGCCCTGCAGGGACAGACCCTGCAACAATCTTTATCTTCAGAGTGCACTTCCAAAACTCTGAGCAACTCATTTACTGATGAAACAAGTTTTGACTTTGAGAGACCTGCCAAGTTGCTGAAAACAATTAGCACTACTAGCGGTTCTAACTCATCTAGCATCACTGAAAACATTTCACCAAAACTTTCACCATCATCATCTATTTCATCCTTCCAGTCTCAGATTCTGTCTTTTGACAACCCCACAAACTCATCCCCTGCCAACACCACCCAGTTTTATGGGTTTGAATGTGCCTTTAACCCAAAACAGAATGAGATGGTGTCACTGTCACTGCCCCAGTTGGGAAATCCTCATCTCTCAACTCAAACCCCAAAAGGGTCCTCAAAAAATCAAAACTTTGAAACAAAAACCTCACATAGTAAGAGGTCTCCAGCTCATGCTCAAGATCACATCATGGCTGAGAGAAAGCGTAGAGAGAAGCTTAGCCAGAGCTTCATTGCTCTTGCAGCTCTTGTTCCTGGCCTAAAAAAGATGGACAAGGCTTCGGTATTAGCGGACGCTATCAAGTATGTGAAAGAGCTGAAAGAGCGTTTGGCAGTGTTGGAAGAGCAGAGCAAGAAAACAAAAGGAGCAGAGTCGGTAGTGGTTCTGAACAAATCAGAGGTCTGTGGTGATGATGATTCCTCTTCATGTGATGAGAGCATTGAAGGTAATGGTGCCACTAAATCAATGTTTCAAGTGGAAGCAAGAGTATCAGGGCAGGAGATGCTGATTCGGATCTACTGTCATAAACATAAGGGAATTGTTGCCAAAATTCTCACCGAGATTCAAAGTTTTTCACCTATTTGTCATCAATAG 945 0.4212 MDDYNLFPDECHLNFLNVDDEEFLSHDIASALQGQTLQQSLSSECTSKTLSNSFTDETSFDFERPAKLLKTISTTSGSNSSSITENISPKLSPSSSISSFQSQILSFDNPTNSSPANTTQFYGFECAFNPKQNEMVSLSLPQLGNPHLSTQTPKGSSKNQNFETKTSHSKRSPAHAQDHIMAERKRREKLSQSFIALAALVPGLKKMDKASVLADAIKYVKELKERLAVLEEQSKKTKGAESVVVLNKSEVCGDDDSSSCDESIEGNGATKSMFQVEARVSGQEMLIRIYCHKHKGIVAKILTEIQSFSPICHQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi61g00058 314 MobiDBLite consensus disorder prediction 73 94 - -
Sebi61g00058 314 MobiDBLite consensus disorder prediction 141 163 - -
Sebi61g00058 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 236 IPR036638 GO:0046983
Sebi61g00058 314 Coils Coil 213 240 - -
Sebi61g00058 314 SMART finulus 180 229 IPR011598 GO:0046983
Sebi61g00058 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Sebi61g00058 314 PANTHER BHLH TRANSCRIPTION FACTOR 29 308 - -
Sebi61g00058 314 Gene3D - 161 239 IPR036638 GO:0046983
Sebi61g00058 314 Pfam Helix-loop-helix DNA-binding domain 178 223 IPR011598 GO:0046983
Sebi61g00058 314 MobiDBLite consensus disorder prediction 141 182 - -
Sebi61g00058 314 MobiDBLite consensus disorder prediction 164 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi61g00058 Sebi-Chr61 1761333 1762391 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi61g00058 64 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.057 6.06e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi61g00058 HLH 2.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi61g00058 - - gmx:100788128 405.986