Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi61g00034 ATGGGAAGTGGACTTTCCAGCTTGTGTTCATGCTTCGAACCGGTGAACCGGACCAACCGACCGGACCAACAGGAACTCATTTTCACAGCCACCGAACCATTGGACGAAACCCTAGGTCACTCCTTCTGCTACGTCAGATCCTCCAATCGCTTCCTCTCTCCCACTCACTCCGATCGATTCCTCTCTCCCTCAACTTCCCTTCGCTTCTCACCAAACCACGACCGAATCCGACCCGAATTTCACGAAACCGGGTTCAAAGCCATTTCCGGAGCCTCCGTCAGCGCTAACAGCTCCGTCCCTAAAACGGTTATACAGTTAGACGAAGATAGCGCCATCGATTGCGCTGGAGGAGCTGCCACTAAGGGTAATATCGTCAATGGGTTTGAAAAGGTTCCTTTCTCGGCGCCGCTTGGGGGGATGTACGCGAGGAAGAAGAAGGGTGTTTCGGGGTTTAGGAAGGCTTTCAACCGGAAGGTGTCGGAGAAGAAGCGGCCGTGGGTTGTGCCGGTGTTGAACTTCGTTGGGAGGAAGGAGGTTCAAGTTCCGACGAGTGAGGGGAGGCCGCCGGTGGTGCCGGAGGCGAAGAACGAGAACAATGTGCAGTGGGCGCTGGGGAAGGCAGGGGAGGATCGGGTTCATGTGGTGGTGTCGGAGGAGCAAGGGTGGTTGTTCGTCGGGATTTATGACGGTTTCAACGGCCCCGACGCGCCGGAGTTTCTGATGGGTCATCTTTACCGCGCTGTTCACAACGAGCTTCAGGGCACAGACCAGAGCGTTGGGCTGGAAAACAAAGAGGGAGAAGATGGTTCGGCGAAGATGGTACAGGGAACGGGAACTGGAACTGGAACGGAGAGTAAACGGCGTAGGCTATGGGAACTTCTCGCTGAAGACCCTGAAGACGGGCTTGATCTTTCTGGGTCTGACAGGAGGAGGAAAGTGGGTCCTGTGGATCATGATCTGGTTTTGAGTGCACTGTCTCGGGCTCTAGAAGTGACTGAGCTTGCATATTTGGATATGACGGATAAGCTTCTTGATACAAATCCTGAACTTGCTTTAATGGGTTCGTGTCTGTTAGTTGCTTTAATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGCCGTGCTATTGTTGCACACTATGAGACCAAGGAGGTTAGTTCTAATGTGGAACCGGGAAGCAAGGGAGACACTGGTTCCAGCACCGAGAGCATAGTTGAGACTGAGAGTGCAATCGAGTTGGGGAATCAGGGTCCTGGTCAAGACATGAGGTTGGTTGCTTTGCAGCTGTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGAATTAAGAATGAGCATCCTGATGATACCCAATGTATAGTCAATGATAGAGTCAAGGGTCGTCTTAAGGTCACCAGAGCGTTTGGGGCCGGATTTTTGAAACAGCCAAAGTGGAACGATGCAGTACTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGTTGTCCTTCACTACGTCACCATAGATTATGCCCGAGAGATCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATTTAAACAATGAAGAAGTGGTTTCTCAAGTTGCGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCCCAACATTTAATAGAAGAACTGCTCCTCCGTGCAGCCAAGAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTGTGA 1827 0.4981 MGSGLSSLCSCFEPVNRTNRPDQQELIFTATEPLDETLGHSFCYVRSSNRFLSPTHSDRFLSPSTSLRFSPNHDRIRPEFHETGFKAISGASVSANSSVPKTVIQLDEDSAIDCAGGAATKGNIVNGFEKVPFSAPLGGMYARKKKGVSGFRKAFNRKVSEKKRPWVVPVLNFVGRKEVQVPTSEGRPPVVPEAKNENNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGTDQSVGLENKEGEDGSAKMVQGTGTGTGTESKRRRLWELLAEDPEDGLDLSGSDRRRKVGPVDHDLVLSALSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYETKEVSSNVEPGSKGDTGSSTESIVETESAIELGNQGPGQDMRLVALQLSTDHSTSIEEEIIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVASFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi61g00034 608 SMART PP2C_4 193 594 IPR001932 -
Sebi61g00034 608 CDD PP2Cc 206 596 IPR001932 -
Sebi61g00034 608 MobiDBLite consensus disorder prediction 260 286 - -
Sebi61g00034 608 Gene3D - 177 603 IPR036457 -
Sebi61g00034 608 ProSiteProfiles PPM-type phosphatase domain profile. 192 596 IPR001932 -
Sebi61g00034 608 Pfam Protein phosphatase 2C 325 385 IPR001932 -
Sebi61g00034 608 Pfam Protein phosphatase 2C 429 564 IPR001932 -
Sebi61g00034 608 PANTHER PROTEIN PHOSPHATASE 2C 194 595 IPR015655 GO:0004722|GO:0006470
Sebi61g00034 608 SUPERFAMILY PP2C-like 206 597 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi61g00034 Sebi-Chr61 904544 909925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi61g00034 1 603 PP2C-type Phosphatase Gene Family AT2G28890 42.472 1.02e-161 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi61g00034 - - gmx:100779143 825.469