Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi619g00015 ATGTCGTTCCCTTATCACCGGCGATCTCAATCGGAGGTACATTACCGGATCCCCGAAGACTTCGACCTCGATCTCGATCTGGATCCTTTCGACGTTCCTCCACCCAATTTCCAAGATCCCGCTCCACAACACGACGACCTCTTATCCTCCTACATCGATTCCGACAAATCTGGATCCAATTTCCAATCGCCACCGCCCTCCACCGGAGCCACCACACCCTGCATTGCGGAGAGTAGCAAATCCGGGAGGCCCGGTCACCGGCGCAGCAATTCCGCCGATGGCTCTTCTTCGTTGTTGGAAGGCATTGAGGCAAAGAAAGCCATGTCCCCTGATAAACTCGCTGAGTTGTGGACCGTTGATCCTAAGCGAGCCAAGAGGATTCTGGCCAACCGCCAATCTGCGGCGCGCTCAAAAGAGAGGAAAGCTTGTTATGTGTTGGAGCTTGAAAGAAAAATTCAAACTCTTCAAACAGAAGCAACTACACTTTCTGCTCAATTAAATCTTTTCCAGAGAGATACAACTGGTCTGAGCACTGAAAATACTGAGTTGAAGCTTCGGTTACAAGCCATGGAGCAGCAGGCTATGTTATGTGATGCTCTAAATGAGGCACTGAAGAAAGAAGTTGATAGGCTCAAGATTGCTACTGGAGAGGTAGTACATGCTGATACCTATGGTTTTGGAATGCATCAGCTTTCATATTCTCAAGCTTCGTTCTCCTTATATCAGCCACAACATGGGCCAAGGGAACTTCAGGCCATACAAATGCCGCAGTTGCATTCACTCTCATCAAATGTATCTACTCCCCATCAGCCTGTGCTTGATCTAGCCACTCCATATGATTTTTCAGAAATTTTGTCAAACGATTCTATAGGCCAATTTCAAGGGCTGGAAATAGGTCACACAGTTAATCATGTTCTGATGCCTGATGGTCCCTCCATTTCTGTTAATAATGTCAACAATGCCTTTTGA 969 0.4716 MSFPYHRRSQSEVHYRIPEDFDLDLDLDPFDVPPPNFQDPAPQHDDLLSSYIDSDKSGSNFQSPPPSTGATTPCIAESSKSGRPGHRRSNSADGSSSLLEGIEAKKAMSPDKLAELWTVDPKRAKRILANRQSAARSKERKACYVLELERKIQTLQTEATTLSAQLNLFQRDTTGLSTENTELKLRLQAMEQQAMLCDALNEALKKEVDRLKIATGEVVHADTYGFGMHQLSYSQASFSLYQPQHGPRELQAIQMPQLHSLSSNVSTPHQPVLDLATPYDFSEILSNDSIGQFQGLEIGHTVNHVLMPDGPSISVNNVNNAF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi619g00015 322 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 259 - -
Sebi619g00015 322 Pfam bZIP transcription factor 122 174 IPR004827 GO:0003700|GO:0006355
Sebi619g00015 322 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Sebi619g00015 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 183 IPR004827 GO:0003700|GO:0006355
Sebi619g00015 322 MobiDBLite consensus disorder prediction 52 78 - -
Sebi619g00015 322 FunFam probable transcription factor PosF21 121 174 - -
Sebi619g00015 322 CDD bZIP_plant_RF2 123 172 IPR044759 GO:0003700|GO:0006355
Sebi619g00015 322 MobiDBLite consensus disorder prediction 25 97 - -
Sebi619g00015 322 Coils Coil 187 207 - -
Sebi619g00015 322 SUPERFAMILY Leucine zipper domain 122 176 IPR046347 GO:0003700|GO:0006355
Sebi619g00015 322 Coils Coil 145 172 - -
Sebi619g00015 322 Gene3D - 121 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi619g00015 Sebi-Chr619 242360 245245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi619g00015 4 298 bZIP Transcription Factor Family AT2G40620 51.220 1.06e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi619g00015 bZIP_1 6.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi619g00015 - - aprc:113852914 440.654