Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi619g00003 ATGGGTAACAGTGGCACGGTAAAAAATCACGGTGGCTTTCTCCTTCGTCCAATTAGAACGAGGCAACTGGGGGTCACTGTCGTGAGGCTACAGCGGTTGCGGCCAAGGGCCTCAACGTCAAAATCGCAGTGGTTTTCTTCTCCATCTATTGAGAACAATGTGCCAAGGTCATTGTCTGAGGCTGCAGCGGCCACGACTAAGGGCCTCTATGTTAAAATCACACTGCACCATGAGGCCAATGGTCCCGTGGCCGATGACAAATCTGGGTCAAAGATTCTCCTTCTCACTCTTCCATGTCTTCCTTTGCAGACATTCAAGCGCAGGAATGGAGGCCGCAACAAACATGGCCGTGGCCACGTCAAATTCATTCGATGCTCGAACTGCGGCAAATGCTGCCCTAAGGACAAGGCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTAGAGATGTTCAGGAGGCCTGTGTTTATGACCAATACACTCTTCCTAAGCTGTATGTGAAGATGCAGTACTGTGTTTCCTGTGCCATCCACTCTCATGTTGTGAGGGTTCGATCTCGCACTGATAGGAGGAAGCGTGACCCCCCACAGCGCTTCATCAGGCGCAGGGATGATGCACCTAGGCCTGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGAGTAGGAGCCCCTGCCCGTGCCTAA 696 0.5244 MGNSGTVKNHGGFLLRPIRTRQLGVTVVRLQRLRPRASTSKSQWFSSPSIENNVPRSLSEAAAATTKGLYVKITLHHEANGPVADDKSGSKILLLTLPCLPLQTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGVGAPARA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi619g00003 231 MobiDBLite consensus disorder prediction 192 212 - -
Sebi619g00003 231 PANTHER 40S RIBOSOMAL PROTEIN S26 104 224 IPR000892 GO:0003735|GO:0005840|GO:0006412
Sebi619g00003 231 Pfam Ribosomal protein S26e 104 207 IPR000892 GO:0003735|GO:0005840|GO:0006412
Sebi619g00003 231 Gene3D Ribosomal protein S26e 103 216 IPR038551 -
Sebi619g00003 231 ProSitePatterns Ribosomal protein S26e signature. 175 182 IPR000892 GO:0003735|GO:0005840|GO:0006412
Sebi619g00003 231 FunFam 40S ribosomal protein S26 103 216 - -
Sebi619g00003 231 MobiDBLite consensus disorder prediction 189 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi619g00003 Sebi-Chr619 30341 32994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi619g00003 104 218 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.478 8.51e-68 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi619g00003 K02976 - qsa:O6P43_014831 217.624