Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi617g00009 ATGGATCTTGGGGTGGTGGGTTTAGATGGGTTGGTGGGTTCAGACACTAGTGGGCATGTTTCTCTTGGTTCTTCAGATCCTGAACCAAAGCACAAATGGTACGGATCTGGGTTACTTAAGCAAGAGAGATCTGCAGGAGGCATCATTGAAGATGATGACTTGAGAAGCTCCAAAATGGCCAAGACTGAAGATGACTTATCTGCTTCCAAAGCAATGCTGAGAAACTCTTCAGTTCTGAGATCTAATGCCACTCTGTTTTCTTCTGATGGGTATCACCAACAGCAAATGCTGAGCTTCTCTTCTCCAAAACCAGAGACTTTGTTAGTAGACAAGGCATCCCCAAAGCTACATTGCCTTATTCTTACACCCCATTGTCTAGTTACAGCAGAAACACAGGTTACAGTTCCGGCAACATGGCATGGGGCTTTTACTGGTTCCAGAGGACCATTCACTCCGTCTCAATGGATGGAACTGGAACACCAAGCTTTGATCTACAAATACATCACAGCAAACGTGCCTGTTCCTTCACATCTTCTAATCCCCATCAGAAAAGCACTTGATTCTGCTGGCTTCTGCAATTTCTCAAACGGACTCCTCAGACCCAATGCATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACTGATCCTGAACCAGGAAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGCCATGCCCTTACTGGAACAACCACCAATACTAGTACTACTAGTAATCCAAATGGTTCTAAGCTCAATGCTAATAATGCTTCTCCTTCTATTGTGGTTCCTCGCAACAACAGTGCATCCAACAACCTCACTTTTGCCACACCAGGAAACCAAGAATATGCATCATCCTCTTGCACCTGATAATACTTCTGCCTCCAACACCATCAACAGGAAACACAATACACATAAGGCTATCAAGGGAATTAGACCCAATTCAAAGGGTTTAGGTGTGGGAAGTGCTCTCAATGAATCAAACAACACCACCACTAGGCAAACTAATTGGATCCCAATTACTTGGGAGAGTTCCATGGGTGGTCCACTTGGGGAGGGTCATCCCCACTGGGGTCCTGCAAAGACAGCATTTGGGTCACTTTCCAATAGCAGTGCTGGGAGCAGTCCAAGGGCAGAGAACAAGAAGACTCAAGAAGGGGCCAGCTTGTGCAATGACCTCTTGGGATCAACTCTTGGGAATGCTTCCTCCTTACCTGCATTGTAA 1242 0.463 MDLGVVGLDGLVGSDTSGHVSLGSSDPEPKHKWYGSGLLKQERSAGGIIEDDDLRSSKMAKTEDDLSASKAMLRNSSVLRSNATLFSSDGYHQQQMLSFSSPKPETLLVDKASPKLHCLILTPHCLVTAETQVTVPATWHGAFTGSRGPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRKALDSAGFCNFSNGLLRPNALGWGGFHLGFSNNTDPEPGRGRHRSRKPVEGQSAMPLLEQPPILVLLVIQMVLSSMLIMLLLLLWFLATTVHPTTSLLPHQETKNMHHPLAPDNTSASNTINRKHNTHKAIKGIRPNSKGLGVGSALNESNNTTTRQTNWIPITWESSMGGPLGEGHPHWGPAKTAFGSLSNSSAGSSPRAENKKTQEGASLCNDLLGSTLGNASSLPAL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi617g00009 413 Pfam QLQ 149 183 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi617g00009 413 SMART QLQ_2 148 184 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi617g00009 413 MobiDBLite consensus disorder prediction 369 390 - -
Sebi617g00009 413 ProSiteProfiles QLQ domain profile. 149 184 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi617g00009 413 MobiDBLite consensus disorder prediction 326 340 - -
Sebi617g00009 413 MobiDBLite consensus disorder prediction 354 390 - -
Sebi617g00009 413 MobiDBLite consensus disorder prediction 310 340 - -
Sebi617g00009 413 PANTHER GROWTH-REGULATING FACTOR 5 92 225 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi617g00009 Sebi-Chr617 184073 187815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi617g00009 40 238 GRF Transcription Factor Family AT4G37740 40.310 2.41e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi617g00009 - - gmx:100807610 294.278