Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi616g00002 ATGGATAATACAGATGATCTTTCGACTGTTAAGTTGGATGATGAGAATGACCCTAGTTATGATGTTGGTCGTGATGATAGTATTAGTGCAGATCCCTCAGATATTAGAGAAGAGAGCCAGGCTGCAGATATGGATGTTGGAGATGGGCAGTATAAGAGGATAACAAATCTGACTAGTGATGATGTAATGGGTTTGGAGTTTGTAACTCAGCATGCTGCTTACAAATTTTATGAGGATTATGCTAAAGCCCATGGTTTTGTAGTAAGGAAAGATGATATAAGGAAGGATTTTAGGGGTAACACTGTGATGCGACAATTTGTATGCAATAGACAAGGATTGAGAAACAAAAAACATTTCATGAGGGTAGACAGGAAAAGGGAGCACAGAGCAATTACCCGAACAAATTGTGGAGCTAAGCTTCGGGTACGTTTCAATCGCAAGAAATCAAAATGGATAGTGGTGTCTTTTGAGGAGGCACATAATCACGAGCTAACCCCTTCAGTATATGTGCATTTATATCCTTCTTATCGTAAAATGAGTGATGCAGATAAAGCTCAGGTTGATAGTTTACGTGCCCATGGTGTTAGAACTTGTCACATTATTGGGTACATGTTGGCCCAAAAAGGCGAATATGGGGGTTTGGGTTTTTGTAAAACAGATGTATACAACTATATTGACAACAAAAGTCGTGTGCAGGTAAAAGATGGTGATGCAATTGCTGCTTTAAGCTATTTAGCAGGTAAGGCACAACATGATCCAACATTATTTGCACAGTTCCAAATCACCACAAAAGAGGATTTCAAGACTGCAATGTATTCCAATTTCACCATAGATGAATTTGAAGAATTTTGGAAGAAGATGTTGTTGAAACATGGTCTTAAAATTGAGAGAGACGCTTCAAAGATTTACACTTTGGAGATGTTCAAAGAAGTTAGGCAGGAGATTGATAAGGCTGGCGCCTTAATTGTTGTTGACCGAAATGTTAATGACAAGAAGTTTATGTTTACACTAAATCAGTATTGTAACCGTGGGCGTGAGATGCATGTTTTGTATGATGCTTCAGATAGCTCTTTTTCATGTGATTGTAGACTTTTTGAAATTCGTGGTATTCCATGCTCACATATATTTTGTGCCATGAAAAATGAGCATGTTGAATCCATTCCCACAAGTTTGATTTTGAAACGCTGGATGAAAACTGCCAAGAGTGATTTCATTAATTCTATTGAATCTAGGGAAGTTCATTCTGATGTGTTGGATGGAGCTCGGTTATCAGCCTTAACTTCTTATTCTTCTAATTTTGTTAAGGTTGCTTATGAAAATAAAGGGTGCTTCAATGAGATAGTGGATGATCTTTTTAAGCTGACTCTGAAGTATCAGAAGAAAACGATCTCTAATGGTCAAAATTCGTCATCTTCATTCATTATTAGTGATCTGACTATCGTTAAAACTAGAGGTGCTCCGAAGAAGAAAAAGACTTGTCCTAAGCTTGGCGGCACAGATGTGAAGGGTGCTAATGATGACGAATTCTGTCCTTCAGAGTCTACTGACAGCAGTGGCAAAAATGATAGTGATAAAGAACCATTTTCACGTGATGTGGGTAATGATCAACAATGTTCACAATCCAATAATGTCTCTAAGTCAAATGATAAGAAAGGAAAAGCGAAAGTACCTGTTACTTGTATTAGGAAGGAGAAGAAATTAGGAAAGAGTGGCCAAATTCAGATGAAGGAAGTTAAAAAAGAAGGTGATATTGGTTGTACTGATTTAAAGACAGAGAACGATCAAAGGTTTGCATCGTTCACTGAAATTAGTATTCCACCATATGCGAATGGTCCAGTAAGTCAACGGGTGCCCATATTACCTCGTTACGATGCTTTTCCTTCATACTGTCAAAATCCTCAGTTCCCGTTTTTTCCACAAGCTGCTCAGTTTTATCCTCCAATCCAAAATATGAATGGACGTTCCTCTTGGAATCAATTGCTTCAACAAGTTATGCAAAATAAGGGTCAATCGAGTGGTAACAACATGAACTCGTGA 2037 0.3795 MDNTDDLSTVKLDDENDPSYDVGRDDSISADPSDIREESQAADMDVGDGQYKRITNLTSDDVMGLEFVTQHAAYKFYEDYAKAHGFVVRKDDIRKDFRGNTVMRQFVCNRQGLRNKKHFMRVDRKREHRAITRTNCGAKLRVRFNRKKSKWIVVSFEEAHNHELTPSVYVHLYPSYRKMSDADKAQVDSLRAHGVRTCHIIGYMLAQKGEYGGLGFCKTDVYNYIDNKSRVQVKDGDAIAALSYLAGKAQHDPTLFAQFQITTKEDFKTAMYSNFTIDEFEEFWKKMLLKHGLKIERDASKIYTLEMFKEVRQEIDKAGALIVVDRNVNDKKFMFTLNQYCNRGREMHVLYDASDSSFSCDCRLFEIRGIPCSHIFCAMKNEHVESIPTSLILKRWMKTAKSDFINSIESREVHSDVLDGARLSALTSYSSNFVKVAYENKGCFNEIVDDLFKLTLKYQKKTISNGQNSSSSFIISDLTIVKTRGAPKKKKTCPKLGGTDVKGANDDEFCPSESTDSSGKNDSDKEPFSRDVGNDQQCSQSNNVSKSNDKKGKAKVPVTCIRKEKKLGKSGQIQMKEVKKEGDIGCTDLKTENDQRFASFTEISIPPYANGPVSQRVPILPRYDAFPSYCQNPQFPFFPQAAQFYPPIQNMNGRSSWNQLLQQVMQNKGQSSGNNMNS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi616g00002 678 ProSiteProfiles Zinc finger SWIM-type profile. 345 383 IPR007527 GO:0008270
Sebi616g00002 678 MobiDBLite consensus disorder prediction 504 555 - -
Sebi616g00002 678 MobiDBLite consensus disorder prediction 1 47 - -
Sebi616g00002 678 MobiDBLite consensus disorder prediction 532 547 - -
Sebi616g00002 678 MobiDBLite consensus disorder prediction 1 43 - -
Sebi616g00002 678 PANTHER OS01G0519700 PROTEIN 294 534 - -
Sebi616g00002 678 SMART 26again6 358 385 IPR006564 GO:0008270
Sebi616g00002 678 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi616g00002 Sebi-Chr616 7717 10941 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi616g00002 FAR1 6.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi616g00002 - - ccaj:109792835 320.857