Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi615g00014 ATGGCATCTGTTTTTGATGTGGTTAAAAACATTTCTCCTGGGAAACAAACTTGGAGGTTGAAAGTAAGGGTTGAAAGGGTTTGGGAAATGTTCCCACTTGATGAGCCAGCAAAACCTTTTTTTGTTGAGATGGTCCTCATGGACTCTAAGGGGGATAAAATTCAAGCTTCCATAAGGAAGCCCATGATGAAAAAGTTTAAAGGAGTGATTATGGAAGGTGAGGTGTACAAAATGTACTTTTTCGGAGATGTTCGTAACATGGGTTCTTTCCGTGCAACTCGCCATGAGTATAAGTTGTTGTTCCATTCAAGGACAAAGGCGTCCAGGTGTGATGCAGCCAATATTCCCTTCATAGGTCTTGATCCATTTTCTTCGAAGCAAATACGTGAGACAGGGGGGGAGAGCGATTTTTTGCTGGATTTTGTGGGGGTGCTGACTGCTGTGTCAGACGAGAAGCGATCTGTTCGAGATGGACGAACCACAAGGGCTGTCCAGATGGAGCTTATTGATGAAAAGGGGAAGGCATATTGCACCCTATTTGGGAACTATGTGGACGTGGTGAAGGACTTCGCCAGTTCAATTGGCTGTGAACTGCCTGTGGTCATCATACAATATGCCAAGGTCAAGAGATTTCGAGGCGTTGTATCCCTGCAAAATGTCCTCAACACAACTCGAATACTGTGGAACCCTGATATTGCTCCGGCAATGGAGTTCAGACGCAGGCTCAAGGTTGAAGCTTATGATGCTGAGGATACCGCTGCCTTTGTAATGTTTGATGCAGACGCAGAAGTGTTGACTGGGACACCCTGTGATCAGTTGGTTAGTGCTTACAAGGATGGTGGATCCGATGAGATGCCTCTTGAGCTGGTAAATCTAGGTGGAAAGGAGGTGCTTTTTAGAGTTGAAAAGGCATATGACTATGCTTTTAAATATGATGATACATTTCGTGTCAAGAATATCTGTGTCGATGAGGAGATAATGGAACATTTCAGGGAGCTGAGAAAGATCTCAACACCCAATGCGAAAAAGTTTCGCATTCCATTTCCTAGCCTAGACGATATAACTGAGGATGGTGCTAATCATAGCATTCCACTTAATCTGAAAGTTGCCACTGAGTCAGGAGACAATAAGGCATTCAATGTAGGAGACTATTTATCAGAGCAGGCTGGTTGTCCTATTGCTGCCTCATCAAGCGATGTTGATGCTTCCAACGTGTCAACTGGAGATGGTTCAAAAGGGAAGTCACATTGCCACTCTTGA 1260 0.4437 MASVFDVVKNISPGKQTWRLKVRVERVWEMFPLDEPAKPFFVEMVLMDSKGDKIQASIRKPMMKKFKGVIMEGEVYKMYFFGDVRNMGSFRATRHEYKLLFHSRTKASRCDAANIPFIGLDPFSSKQIRETGGESDFLLDFVGVLTAVSDEKRSVRDGRTTRAVQMELIDEKGKAYCTLFGNYVDVVKDFASSIGCELPVVIIQYAKVKRFRGVVSLQNVLNTTRILWNPDIAPAMEFRRRLKVEAYDAEDTAAFVMFDADAEVLTGTPCDQLVSAYKDGGSDEMPLELVNLGGKEVLFRVEKAYDYAFKYDDTFRVKNICVDEEIMEHFRELRKISTPNAKKFRIPFPSLDDITEDGANHSIPLNLKVATESGDNKAFNVGDYLSEQAGCPIAASSSDVDASNVSTGDGSKGKSHCHS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi615g00014 419 MobiDBLite consensus disorder prediction 397 412 - -
Sebi615g00014 419 Pfam Domain of unknown function DUF223 43 112 IPR003871 -
Sebi615g00014 419 CDD RPA1_DBD_A_like 19 106 - -
Sebi615g00014 419 SUPERFAMILY Nucleic acid-binding proteins 6 110 IPR012340 -
Sebi615g00014 419 SUPERFAMILY Nucleic acid-binding proteins 131 247 IPR012340 -
Sebi615g00014 419 SUPERFAMILY Nucleic acid-binding proteins 234 330 IPR012340 -
Sebi615g00014 419 CDD RPA1_DBD_B_like 140 243 - -
Sebi615g00014 419 Gene3D - 128 231 IPR012340 -
Sebi615g00014 419 Gene3D - 7 112 IPR012340 -
Sebi615g00014 419 MobiDBLite consensus disorder prediction 397 419 - -
Sebi615g00014 419 Gene3D - 232 335 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi615g00014 Sebi-Chr615 378276 381016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi615g00014 46 255 Core DNA Replication Machinery Family AT2G06510 25.893 3.44e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi615g00014 - - lja:Lj6g3v0884310.1 247.284