Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi615g00012 ATGGCTGTGGAGCTTATAACGGGATATCGTGGTGATAGCTTTGCAACAAGAAATAGTGTGAGGGATGACAATGCCATGCCGTACAAGAAGCAGCTTCTGCTGATTCAAAGAAGTATTTCTCTCCTTGATAGACCAAGAACTGGTCACGCTCGTTTCAGAAGGGCTCCTCCAACTGTGCCACCTGTTCCTCTTCTTCAATTGCAGCAAACAGTGGATTCAAAACCCAAACTGCTTCAGCCACAACAGAGCAAAACAGAACAAGTCTCTGCTTTTGAGGTTTATTGCCCTACACCGGTTCTACGTCCTCCTCCTTTTCCGCTACCTCAGCAGCAGCAACCACCAGAGAAGAATGAAGCACTTGGGGACAGTGAAAGTTTGCAACAACGACCCTGTCGTCTTCAGGGTTCCCAATCACTCATGTTTCTTCTTTTTATGCGTAAACCACCACTGTCTTCAACTTCTATGAAAAGGAAGTGCAATTCCATGGAGTTTCCTGCTATCAAGTGTGGATCATCCTCTGCCCAGTGCCATTGCTCTAAGAAAAGGGGTTATTACAAGTGCACTAGCGTGAGAGGCTGCCCAGCACGCAAACACGTGGAGCGCGCTGTGGATGATTCTAACATGCTTATTGTCACCTACGAAGGAGATCATAATCACACAAACAATTCTTCTGAGGTGGCTAATGCTGTTGTCCTGAATCATCTTGATCCAATTGCTGATAATCTTTTGCGAGTTTTTTGTTCTCACCCACCCCCAACTTCCCATGCATTGTGCTAA 777 0.4607 MAVELITGYRGDSFATRNSVRDDNAMPYKKQLLLIQRSISLLDRPRTGHARFRRAPPTVPPVPLLQLQQTVDSKPKLLQPQQSKTEQVSAFEVYCPTPVLRPPPFPLPQQQQPPEKNEALGDSESLQQRPCRLQGSQSLMFLLFMRKPPLSSTSMKRKCNSMEFPAIKCGSSSAQCHCSKKRGYYKCTSVRGCPARKHVERAVDDSNMLIVTYEGDHNHTNNSSEVANAVVLNHLDPIADNLLRVFCSHPPPTSHALC 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi615g00012 258 SMART WRKY_cls 177 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi615g00012 258 SUPERFAMILY WRKY DNA-binding domain 179 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi615g00012 258 Gene3D WRKY domain 155 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi615g00012 258 Pfam WRKY DNA -binding domain 179 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi615g00012 258 ProSiteProfiles WRKY domain profile. 182 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi615g00012 258 MobiDBLite consensus disorder prediction 112 127 - -
Sebi615g00012 258 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 181 225 IPR044810 GO:0003700
Sebi615g00012 258 MobiDBLite consensus disorder prediction 102 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi615g00012 Sebi-Chr615 318904 320516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi615g00012 147 219 WRKY Transcription Factor Family AT2G24570 37.815 2.36e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi615g00012 WRKY 4.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi615g00012 - - lja:Lj0g3v0162929.1 218.009