Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi614g00010 ATGAAGAATTCCCTGATAATAGCCTTTTCCATAACCATATGCTTCATAGCTTTTGTCATATCCAAGATTTTTATCTCGGTCCTCCTCTACAAAAGATGGAGAAGAAAGCAATTGATTTATGAAGATGGTTTTACAGGAGGGAAGATGGTGATATTTAGGTCTTCAGTGCTTAAATCTCTCACATCTGATATGGTCTTAAAGAAGACACAGAAACTGAACAACAAGGACATCATTGGGTCAGGAGGTTATGGTGTAGTTTATGAACTAAAACTAGATGACTCCACAGCCTTTGCTGTGAAAAGGCTAAATCGTGGAACTGCAGAGAGAGATAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAACACCGCAACATTGTGACTCTTCATGGATATTATAGTGCACCACACTACAATCTTCTCATATATGAGCTAATGCCTAATGGAAGTTTGGATTCCGTTTTGCATGGCTCATACCTTCTTTCCCATAGAGTAGTGAAGGCTGTTGTTCGAGAGAAGAAAGAGGAGCTAGTTCTTGATAGTAGCTTAGGGTCTTGTCCAATGCAAGAGGTCAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGATCCCTTGAAGAGGCCAACCATGGCTGAGGTTGTCAACTTGCTTGAGCAAACAGAATCAAACCAACTTGTTACAGCATCCTGA 702 0.4046 MKNSLIIAFSITICFIAFVISKIFISVLLYKRWRRKQLIYEDGFTGGKMVIFRSSVLKSLTSDMVLKKTQKLNNKDIIGSGGYGVVYELKLDDSTAFAVKRLNRGTAERDKGFERELEAMADIKHRNIVTLHGYYSAPHYNLLIYELMPNGSLDSVLHGSYLLSHRVVKAVVREKKEELVLDSSLGSCPMQEVNKVFNIAMMCLEPDPLKRPTMAEVVNLLEQTESNQLVTAS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi614g00010 233 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Sebi614g00010 233 ProSiteProfiles Protein kinase domain profile. 72 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi614g00010 233 Pfam Protein kinase domain 74 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi614g00010 233 Gene3D Phosphorylase Kinase; domain 1 48 145 - -
Sebi614g00010 233 SUPERFAMILY Protein kinase-like (PK-like) 51 171 IPR011009 -
Sebi614g00010 233 SUPERFAMILY Protein kinase-like (PK-like) 184 225 IPR011009 -
Sebi614g00010 233 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Sebi614g00010 233 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 174 226 - -
Sebi614g00010 233 SMART serkin_6 72 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi614g00010 233 Gene3D Transferase(Phosphotransferase) domain 1 146 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi614g00010 Sebi-Chr614 340428 342836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi614g00010 5 158 Receptor kinase-like Gene Family AT2G35620 39.490 2.55e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Sebi614g00010 Pkinase 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi614g00010 - - gmx:100305410 284.263