LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi613g00018	ATGGCATTTGCAGAAGAGGAGCCTTTCAAGAGAGTTTATGGCCCCTTTTTTGTGTATATGAACAAAGAAGATTCACAAGCCCTCTGGTCTGATGCTGTACAACAGCTGTCTGAGGAAATCAAAAGTTGGCCCTATGATTTCCCTAAATCAGATGATTTTTTCAAACCCAACAAACGAGGAACAATTCAAGGACGATTACTAGTCCAAGACAGGTACATTAATGGAGGGAGATTTCCATATGGCAATAATGCTTATGTTGGTCTGGCTCTACCTGGAGATTTGGGATCATGGCAAAACAATGCAAGTCCTCCAAGAAATGGACCTACCATATGGGAAATTGGCATCCCAGATCGCTCTGCTGCAGAGTTTTATGTTCCAGATCATTATCCTAACCTTGTCAACCGATTATACATTGGGAAACCAGAACACAAGTTTAGGCAATATGGACTATGGCAGCGTTACACTGAGTTATATCCAAATCAGGACCTCGTTTATAATGTTGGTGTTAGTGATTATCGTAAAGATTGGTTTTATGCTCAGGTTACCAGGAACATAGGAAACAACACATTTCGCCCAACCACATGGGAGATTAGATTTCATCTACCATTTGTTATAAGAGGAAACTACACTCTTCAACTTGCATTGGCCTCAGCTGCAAGTTTTACCTTAGTGGTTCGGTTCAATAACCCTGTGGCTATTCCTATGCACTTCTCTACTGGATTGATCGGCCAAGACAATGCAATAGCAAGACATGGCATCCATGGATTGCACTGGCCTTACAACATTGAATTACCTAGCCATCTATTGGTAGAAGGAAACAACATAATCTATCTGAGGCAGGCTAAAGGTGTAACTCCTTTCCAAGGTATTATGTATGACTACATCCGTTTGGAAAGTCCTGGAACTTGA	909	0.4136	MAFAEEEPFKRVYGPFFVYMNKEDSQALWSDAVQQLSEEIKSWPYDFPKSDDFFKPNKRGTIQGRLLVQDRYINGGRFPYGNNAYVGLALPGDLGSWQNNASPPRNGPTIWEIGIPDRSAAEFYVPDHYPNLVNRLYIGKPEHKFRQYGLWQRYTELYPNQDLVYNVGVSDYRKDWFYAQVTRNIGNNTFRPTTWEIRFHLPFVIRGNYTLQLALASAASFTLVVRFNNPVAIPMHFSTGLIGQDNAIARHGIHGLHWPYNIELPSHLLVEGNNIIYLRQAKGVTPFQGIMYDYIRLESPGT	302

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi613g00018	302	PANTHER	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	102	300	-	-
	Sebi613g00018	302	Gene3D	-	106	298	-	-
	Sebi613g00018	302	CDD	RGL4_C	111	298	-	-
	Sebi613g00018	302	SUPERFAMILY	Galactose-binding domain-like	106	298	IPR008979	-
	Sebi613g00018	302	Pfam	Polysaccharide lyase family 4, domain III	109	297	IPR029411	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi613g00018	Sebi-Chr613	541067	543142	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi613g00018	3	300	Polysaccharide Lyase	AT1G09890	46.556	2.43e-102	310

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi613g00018	K18195		-	gmx:100792575	479.174