Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi613g00010 ATGGAAGCTTTTGAGAGAAATTTCACAGGCTGTGGGGTAGAGAAGCTAGCAAGTGGAGTTGGTGGATGCTCTGACTACACTGTTACAGATGTTATCAACAAGCTTGGAGGGAACTTGAGGAAATTGGATGAAGATTGCATGCCTTTAAGCATAAATGGCAAGGCAAATGAAACTTGCACTACATGTTGGAAAGCATGGGAGGATATCAGTGCAAGATCAGAGGGTATAAAGAGATCAGAGTCAGCAATTCTCAGTACTTATCTTTGTAGGTTTGCTGTGCTTGTCTCACTAACAAGCACAAGAATTTATGAAAGGGAATCAATTCAGGCAGTTTATAAATGCCTTGGGGGACACAGCCCTGCTGCAGATGAGCTAGAAGTCAAGGCTAGGGGCAATGCTAATATCAACCCAGGTCTCTGGATTCTTGCCTTTGGTTTAGCAGGAGTTACAGTAGTAGTTCTTCTTGCTGCTGCAATTGCATTGCTTGTCAGAAGAATTAGAAGTGCTCCAACCGTAGAAGATGAGTCTGAGTATTCAACATCACAAAAGATCACTTTGAAGGATGTTTATGTAGCAACTAACAATCTCAGCGCTTCAAATTTCATTGGCCAAGGCATAGCTGGAAAAGTGTACAAAGGTATACTCCCCAATGGGCACTATGTTGCAGTAAAGCATATCATCAAGGAAGGTTATATGGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCCCATGTAAAACATCCAAATCTAGTAGCATTGCTTGGATACTGTGCAAATGAAGCTGAATGCTTCCTAGTGTATGAACTGTGCCACCACGGAAAGCTCTCAGATTGGCTATTTGGCAATGATAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCCATAGATAGCGCACGAGGTCTTGAGTTTCTCCACACCTACCCAGTTTCCTTCTTTAATCTTTTGTTATATATGGTGTATTGTCAGCCATCAAACATTCTTATTGATTCCAACTTCCAAGCAAAGCTTTCAGACTTTGGGTTGTCCAGGGTTATGGACCCGGGTCAATCCTATGTGAGCTCTGAAGTGAGAGGAACATTTGGTTATATTGATCCTGAATATCGGAGAAATCACCATGTAAATGCCTCAGGAGATGTCTACAGCTTTGGGATAGTGTTACTGCAACTACTATCAGGACAAAGGGTCCTTAACATTGATTTCCAAAGACCAATGTCCCTAAGTAAAATGGCCAGAGATTTTGCTAGAGGTGGTGAAATTTCAGGATTCGCTGACCCTAAACTCAAAGGGGCGTACTCTATAGAAGCATTTGAGATCATATTAAAGCTAGCTTTGTTATGCATAGGGCTCAAGAGGCAAAGGCCCTCTATAGAACAAGTTGCCAATCAGGCTACCTCAGGCAGTGTCCCCGGGGGGAATGATCCCGGTTTCCAGGCAGATGTTCAGCCTGATGCTAATCCGAAAAGGAAGAGGAACTCAGGGAAGGGGGAGCAAGCCCATAAAAAGAAGAAGAAGTCCAACTGGGATAAGGATCATGATTAG 1542 0.4274 MEAFERNFTGCGVEKLASGVGGCSDYTVTDVINKLGGNLRKLDEDCMPLSINGKANETCTTCWKAWEDISARSEGIKRSESAILSTYLCRFAVLVSLTSTRIYERESIQAVYKCLGGHSPAADELEVKARGNANINPGLWILAFGLAGVTVVVLLAAAIALLVRRIRSAPTVEDESEYSTSQKITLKDVYVATNNLSASNFIGQGIAGKVYKGILPNGHYVAVKHIIKEGYMETFVREVRSLSHVKHPNLVALLGYCANEAECFLVYELCHHGKLSDWLFGNDKVLSWIQRLEIAIDSARGLEFLHTYPVSFFNLLLYMVYCQPSNILIDSNFQAKLSDFGLSRVMDPGQSYVSSEVRGTFGYIDPEYRRNHHVNASGDVYSFGIVLLQLLSGQRVLNIDFQRPMSLSKMARDFARGGEISGFADPKLKGAYSIEAFEIILKLALLCIGLKRQRPSIEQVANQATSGSVPGGNDPGFQADVQPDANPKRKRNSGKGEQAHKKKKKSNWDKDHD 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi613g00010 513 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 104 463 - -
Sebi613g00010 513 SUPERFAMILY Protein kinase-like (PK-like) 174 462 IPR011009 -
Sebi613g00010 513 Gene3D Transferase(Phosphotransferase) domain 1 271 469 - -
Sebi613g00010 513 FunFam Serine/threonine kinase protein 161 269 - -
Sebi613g00010 513 Gene3D Phosphorylase Kinase; domain 1 158 269 - -
Sebi613g00010 513 ProSiteProfiles Protein kinase domain profile. 196 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi613g00010 513 MobiDBLite consensus disorder prediction 461 513 - -
Sebi613g00010 513 Pfam Protein kinase domain 200 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi613g00010 Sebi-Chr613 251276 256766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi613g00010 142 460 Receptor kinase-like Gene Family AT1G70130 35.385 5.85e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Sebi613g00010 Pkinase 1.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi613g00010 - - gmx:100790181 662.144