Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi613g00007 ATGAGCACAGAACCAAATTGTGGTGATCCTCACTCTCAAAAGCTTTACTTTGACACCCTCAATAGAAGTTCATATCTTGTACTCAGAATCATGTCTTCAATACAACGTTTGGTGGTTCAACCATCACCTTGGCTACCTGGTTCATGTGTTACACAAGACATGCCAGTTAACAATGGTATTTGGTTAAACCAATCACTCCCTTTGGTTTCTCCTCTTAACTGCACTTCTTCAAGTATTTGCCATCATTACTTGGAGAGTTCAGGTCATGTTGATACAAAAAGAGCACTTGAGTGTGCAAGTGATCTTCACCCTTGTTGCACCTTTGTTGCTGGTGGGAAACCTGCTAATCAGTGGGAGGAAGGCCTTGAAATTCAATGGACTCCTCCACCTGAACCTGTCAAAGGGATTGCTCTGGAGACTCAAAGTGTTCCCCTGCTGATAACAAAGTCTTGCAAACTCTCTAGCAATAGGGAGAAGAAGCAGGCCAAGGAAAGAGAAGTTGTGCTGAAATCAAGGAGTGGTGGCTTTGGGGAAGTCTACAGAGGTGAATTACAAGATGGAACACTGGTGGCTGTCAAGAAAGCTAGAGTGGGGAACTTGAAAAGCACTCAACAAGTGCTTAATGAGGTTGCAATACTTTCTCAAGTCAATCACAAGAACCTAGTGAGACTCTTGGGCTGTTGTGTTGAATCTGAGCAGCCTTTGATGATCTATGAGTATATCTCAAATGGGACCCTCTATGACCATGTTCATGGTAGGTCAGATTTTGGGCTCTCTAGATTGGCTAACCCAGGACTTAGTCATCTGTCAACCTGTGCTGAAGGAACACTGGGGTACTTGGATCCTGAATATTATAGAAACTACCAGATAACAGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGCTTTTAACTTCCCAAAAAGCAATAGACTTCACTCGTGATCAAGATGATGTGAACCTAGCAATTCATGTGAGTCAATATCCTAAAAAAGAGAAACCATCATCAGAGATGCAAGGATATGAAGGCGGTCATCATCTAGAGATCTAA 1059 0.423 MSTEPNCGDPHSQKLYFDTLNRSSYLVLRIMSSIQRLVVQPSPWLPGSCVTQDMPVNNGIWLNQSLPLVSPLNCTSSSICHHYLESSGHVDTKRALECASDLHPCCTFVAGGKPANQWEEGLEIQWTPPPEPVKGIALETQSVPLLITKSCKLSSNREKKQAKEREVVLKSRSGGFGEVYRGELQDGTLVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESEQPLMIYEYISNGTLYDHVHGRSDFGLSRLANPGLSHLSTCAEGTLGYLDPEYYRNYQITDKSDVYSYGVVLLELLTSQKAIDFTRDQDDVNLAIHVSQYPKKEKPSSEMQGYEGGHHLEI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi613g00007 352 Pfam Protein kinase domain 254 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi613g00007 352 ProSiteProfiles Protein kinase domain profile. 165 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi613g00007 352 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 173 253 IPR044652 GO:0004672
Sebi613g00007 352 Gene3D Transferase(Phosphotransferase) domain 1 245 345 - -
Sebi613g00007 352 MobiDBLite consensus disorder prediction 333 352 - -
Sebi613g00007 352 SUPERFAMILY Protein kinase-like (PK-like) 173 323 IPR011009 -
Sebi613g00007 352 MobiDBLite consensus disorder prediction 338 352 - -
Sebi613g00007 352 Pfam Protein tyrosine and serine/threonine kinase 173 251 IPR001245 GO:0004672|GO:0006468
Sebi613g00007 352 Gene3D Phosphorylase Kinase; domain 1 172 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi613g00007 Sebi-Chr613 200359 201864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi613g00007 173 336 Receptor kinase-like Gene Family AT5G02070 46.429 9.74e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sebi613g00007 Pkinase 2.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi613g00007 - - twl:119989654 431.795