Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi611g00020 ATGCTTATTCTCAATGAGAATATGTTTGATGGTGCTCTTCCTGCTACGTTGTGGTCAATTCTACCCAACTTGCACTTTCTTGATGTGTCCAGCAACACCCTCACTGGTCCCCTGCCTAAACTCACTACTTTGACAAGTACTAATTATAGTGGTGCCACATTCAATCTCTCAAACAATTTGTTCTATGGGCCTCTGTACCTGAATAATACTTTGCTTAGCAAGTTTAAGATAATTGATTTGTCCAGTAATTATTTCCAAGGTGAGGTGCAAGTTGGTGGTTTTAAATTTTCTAATAGTGTTAGTCTTGCTAAAAATTGCCTACAGATGATTCCAAACCAGAGGGATTTCTGGGATTGTAGAGTGTTTTATGCTGAGAGAAATTTACCTTTTAGTCCCGGTGCCCCAGAACCAATGCAATCACCCTTGCAAGATTCTAAGTCCAGGAACAAGAACAACAAACGAGTGATATTCATAGTGGCAGGGGGACCTCAAATGTGGGGGGCTGATATAGAAGTGGAAAGTCCTGTACCTCCCAAGGATCCTGACTTTGTAGCTGGCATAGGGGAATTGTTTACTCATGAGCAAGTGCTCCGTTTGACTGATAATTTTGCTGAAGTAAATTTAATCAAGCATGGTCATTCTGGAGACCTCTTCAAGGGAACCTTAGAAGGTGGAGTAACCGTGGTTGTTAAAAAGGTAGATTGGAATTTATGTAAGAATGAACCATTCATGGTGGAGTTAGGACTATTAAGCAAGGTTACACATGCAAGATTGGTCCCACTCTTGGGGCATTGCTTGGAGAATGAGCATGAGAAATATATAATTTACAAGCATATGCCAAATGGAGATTTGGCTACTTCCTTGCACAAAGTCAACTGTTCAGATGATAAATTAAAGTCTCTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTATCTTACTTACATGAATGCAGCCCTCCTCTAGTTCACAGAGATGTCCAAGCAAGAAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGCGAGGTTACTGCCCAAGGAGATCTTCATCAGAGTGTCATTTCAAGGATTTTCTGCAAGTCATCATCTTTTGATCAAGGCAATTCTGGTTCCTCATCTGCGACTTGTGCCTATGATGTCTACTGTTTCGGGAAGGTTTTACTCGAGCTCATTACTGGAAATATTGGTGTCAGCAAATCAGATGATCCGGGAACTAAAGAGTGGTTAGATCAAACCCTGTCATACATCAGTATATATGACAAAGAACAGGTAACTGGGATTGTTGATCCATCTTTGATCATAGATGATGACTTATTGGAAGAGGTATGGGCAATGGCAATTGTGGCCAGGTCATGCCTGAATCCCAAGCCTTCCAAACGCCCTCCTATGAGATATGTTCTCAAAGCATTGGAAAATCCAGTGAAGATTGTCAGAGAGGAAAATTATAGCTCAGCCAGGTTGAGAACAACTTCATCTAGGAGATCTTGGAGATTTGCATTCTTTGGTAGCTGGAGACAGAGCTCATCAGAGACTGCTACAAACAGAGAGGGTACTAGTGGGCTTTTTCTTCATCTTCACGTAAAAGATCATCCAATGAAATTTTCCCTGAACCATTGGAAATACAAGAGATGGATAGGCAAGATGAGCATTATGAAAATGGATTTGATTAGTCTTTGA 1707 0.4083 MLILNENMFDGALPATLWSILPNLHFLDVSSNTLTGPLPKLTTLTSTNYSGATFNLSNNLFYGPLYLNNTLLSKFKIIDLSSNYFQGEVQVGGFKFSNSVSLAKNCLQMIPNQRDFWDCRVFYAERNLPFSPGAPEPMQSPLQDSKSRNKNNKRVIFIVAGGPQMWGADIEVESPVPPKDPDFVAGIGELFTHEQVLRLTDNFAEVNLIKHGHSGDLFKGTLEGGVTVVVKKVDWNLCKNEPFMVELGLLSKVTHARLVPLLGHCLENEHEKYIIYKHMPNGDLATSLHKVNCSDDKLKSLDWITRLKIAIGAAEGLSYLHECSPPLVHRDVQARSILLDDKFEVRLGSLSEVTAQGDLHQSVISRIFCKSSSFDQGNSGSSSATCAYDVYCFGKVLLELITGNIGVSKSDDPGTKEWLDQTLSYISIYDKEQVTGIVDPSLIIDDDLLEEVWAMAIVARSCLNPKPSKRPPMRYVLKALENPVKIVREENYSSARLRTTSSRRSWRFAFFGSWRQSSSETATNREGTSGLFLHLHVKDHPMKFSLNHWKYKRWIGKMSIMKMDLISL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi611g00020 568 Pfam Protein tyrosine and serine/threonine kinase 209 478 IPR001245 GO:0004672|GO:0006468
Sebi611g00020 568 SUPERFAMILY Protein kinase-like (PK-like) 184 480 IPR011009 -
Sebi611g00020 568 SUPERFAMILY L domain-like 2 113 - -
Sebi611g00020 568 Gene3D Ribonuclease Inhibitor 1 125 IPR032675 -
Sebi611g00020 568 FunFam Predicted protein 174 278 - -
Sebi611g00020 568 Gene3D Phosphorylase Kinase; domain 1 183 278 - -
Sebi611g00020 568 Gene3D Transferase(Phosphotransferase) domain 1 279 501 - -
Sebi611g00020 568 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 89 - -
Sebi611g00020 568 FunFam Putative LRR receptor-like serine/threonine-protein kinase 279 500 - -
Sebi611g00020 568 ProSiteProfiles Protein kinase domain profile. 203 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi611g00020 Sebi-Chr611 396922 400009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi611g00020 2 368 Miscellaneous Gene Families AT2G16250 44.638 5.56e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Sebi611g00020 PK_Tyr_Ser-Thr 8.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi611g00020 - - gmx:100815313 659.833