Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi611g00010 ATGTGGCCAATTCAGTCAGCTCTCTTCTCTTCTCCCCCACAGCGCCGCCCGCCGTCGCCTAGAGATCTGCCCGTCTTCAACCCCGCCGGTGCATTCAAGCAGCAGCTAGGCCGTCAGCTTCTCGTGGTCGTCGCGTGGAGAGTTGCTGGAGAGGGTCGTCTTCCTCGCCGTGCGTTCAGCCATTGGAGATCTGCTGCTGTCTTCCGTCGCCCCCTTCGCGTTCAGGCACCAGGCTCGTCCGTAAGCTTCGTGTTGTCGTCGCGTGGAAAGCTGCCGGAGAAGGTCGTCCTCGGCGTGCGTTCAGACATTGGCGCGGTGGAGAGCTTGGAGTTTCCGTCGCGTGCGCCGCTGCTGGAGAAGGTTACTGAACCTGCAATTCAGATGGTTAACATAGGTGAGGAGCCATGTATTAATTTAGATGATGACAGAGATGATAATGATAGTTATGGTGTTAGCATTGATGAAAGTGTTCATGGAGAGGACAGTGGTGTAGGGGGTCAAATGAGCAGGGAGAACTGGTTTCACCAGATGAAAAATGAACATGAGGCATGTATATTTTATGAGACATATGCTAAGTCTATTGGGTTTTCTGTGAGGAAAGATGATGTAACTAGAGATTCTAAAGGTCAGGTGGTAATGCGACAAATCGTATGCAACAGAGAGGGTTTGAGGAATAAAAAGCACTTCAGGAGGGTTGACAGAAAAAGACCCCATAAACCAATAACTCGCACAAAGTGTCCAGCTAAGTTGAGGGTGCATTATGATTTCAAGAATTCAAAATGGAAAGTGGTTTCTTTTGTGGAGACCCATAATCACGATCTAACCCCAGCAATGTATAGGCACCTAATGCCTACATACCGTGTTATTTCTGATGCGGACAAAGCTCAGGTGGATAGCTTGCACTCAAGTGGGGTTAAGACATGTCATATAATGGGATATATGCTGTCACAAAAAGGGGGATATGGAGCTTTTCTGGATGCAATGCAAAATAGACCACCTAAAGCAGTGGTAACAGATGGAGATGTTGCTATGAGAGAGGCTATAAAGACTGTGTTTCCGGACGCTTCACATCGCCTTTGTGCATGGCATTTGCACAAGAATGCATGTGAGAATGTGAAGAATTCTCCTTTTCTAGAAGATTTCAAGAAAGCAATGTACTCTAACTTTACCCCAGATGAGTTTGAAGAATTTTGGCACAAAATGGTGGTGAAACATGGTCTTCAGGGGAATAAATGGGTTTCCAAATCTTACCAAAATAAGGCATTGTGGGCCACTGCGTACTTGCGTGATAAATTTTTTGGTCGTATAAGGACCACTTCTCAATGTGAAGCAATTAACTCATTGATCAAGTCTTATGTTGAGAAGAAAAATAGCATTCTTGAATTCTTGCACAATTTTGAGAAAGTTTTGAAGGAATATAGGAACAATGAGCTAATGGCAGATTTCAAGTCTCTTTTTACTGAACCTGTTTTGACCACATATCTGAACAAGATTGAGCGTCAAGCTGCACAAATTTTCACTCAAGAAATTTTTAAAGAGGTCAAGAATGAGATTGAAGGATCTGGTGCATTTAATGTTGTTGAGCGAGTTGAAAATACATCCCAAGTGACATATAAGCTTAATAAATATTGTAAGCCAGACCGTAAAATTTGTGTTGCTTATGATATTTTGAAGTCAGAATTTCTCTGTGATTGTAAACTATTTCAGTCTCGTGGCATTCCATGTTGTCATGTTATTTGTGCTATGAAACATGAGCACATGGACCACTTTCCAAACAGTTTGATTTGTAAAAGGTGGACTAAGACAGCTAAAAGTGAGTACATTTCAGCAGCAAATTCAGAGGAATTGGAATCCGATACAATGATTGTTGCTCGTTTTGCATCTCTAGTTGCTTCTTGCAATAGACTTTGTGAGATTGCCTCAAAAAGTAGTGAAACATTCAAGTGGGTAAGAGATGAGATGTTCAAGCTTATTAATAAGATAGAGAAAAAGGGTAAAACAAAGACCAAAGATAGCTCTTCTTTTGAAGATGTCCATGATCCGGATGTGGTCAAAACCAAGGGTGCTCCAACAAAGAAAAATCATGGGAGGAAGAGGAAACGATGCTCTAACTGTAACAGAACTGGACATATTAAAAAAAGATGTCCAAGGCTTATTGCTGAAGTCAATCGAACTGTAAAAAATGATGATTATAAAGTAGCCACTGCTGGAAATTATCACAATGTAGAAGATAATGATAAAGAAATAAAACCTGATGATGCCATGGGTGAAGACAATGTAATGAGAAATGTCAACAGTGCTAAAAATGAGAATGGGGTTAAAGGGGTGAAACTTGATGAAGACATTAGAGACATGAAGACTATGAGAAATGTGAATGTTACTCATGATGAAAAGAATGTTAATGGAGTCAAATTTGATGAAGACAAATGTGAAGACAGTGTGATTAGAAATTTTGTCTCAAGTCATGAACATGAAAAGGTGAAGGATAAAGTAATCACTTCTACTGATGGAATTAAAGAGCAGCAGCCTTTAATCAGTGATGTGAATGCAACTCATAATAAGAAAGATTTTAAACCCATTCAACCTTCTGGTCGAGTTAATTTTGCTAGTCCTGAAGGATATGGTATGATACCCCCACCCTATAACTTACCATTTGGATATCCACCTTCAACTATGGTGGAATTCCTCTTATCCTCACCCATCCCAACCTCAATATGGTGGAGTTCCTTTTATCATCATCCCTCCAATCTCAATATGGTGGATATCAATGGCCACAGTGCTGGTGGCATGTCTAATGCGTTGCGGGATGAAGTTATTAAAAAGGGTGGTCCAAGCAGTAAGTTTTGA 2847 0.4117 MWPIQSALFSSPPQRRPPSPRDLPVFNPAGAFKQQLGRQLLVVVAWRVAGEGRLPRRAFSHWRSAAVFRRPLRVQAPGSSVSFVLSSRGKLPEKVVLGVRSDIGAVESLEFPSRAPLLEKVTEPAIQMVNIGEEPCINLDDDRDDNDSYGVSIDESVHGEDSGVGGQMSRENWFHQMKNEHEACIFYETYAKSIGFSVRKDDVTRDSKGQVVMRQIVCNREGLRNKKHFRRVDRKRPHKPITRTKCPAKLRVHYDFKNSKWKVVSFVETHNHDLTPAMYRHLMPTYRVISDADKAQVDSLHSSGVKTCHIMGYMLSQKGGYGAFLDAMQNRPPKAVVTDGDVAMREAIKTVFPDASHRLCAWHLHKNACENVKNSPFLEDFKKAMYSNFTPDEFEEFWHKMVVKHGLQGNKWVSKSYQNKALWATAYLRDKFFGRIRTTSQCEAINSLIKSYVEKKNSILEFLHNFEKVLKEYRNNELMADFKSLFTEPVLTTYLNKIERQAAQIFTQEIFKEVKNEIEGSGAFNVVERVENTSQVTYKLNKYCKPDRKICVAYDILKSEFLCDCKLFQSRGIPCCHVICAMKHEHMDHFPNSLICKRWTKTAKSEYISAANSEELESDTMIVARFASLVASCNRLCEIASKSSETFKWVRDEMFKLINKIEKKGKTKTKDSSSFEDVHDPDVVKTKGAPTKKNHGRKRKRCSNCNRTGHIKKRCPRLIAEVNRTVKNDDYKVATAGNYHNVEDNDKEIKPDDAMGEDNVMRNVNSAKNENGVKGVKLDEDIRDMKTMRNVNVTHDEKNVNGVKFDEDKCEDSVIRNFVSSHEHEKVKDKVITSTDGIKEQQPLISDVNATHNKKDFKPIQPSGRVNFASPEGYGMIPPPYNLPFGYPPSTMVEFLLSSPIPTSIWWSSFYHHPSNLNMVDINGHSAGGMSNALRDEVIKKGGPSSKF 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi611g00010 948 MobiDBLite consensus disorder prediction 669 689 - -
Sebi611g00010 948 Pfam MULE transposase domain 323 367 IPR018289 -
Sebi611g00010 948 Pfam FAR1 DNA-binding domain 186 275 IPR004330 -
Sebi611g00010 948 SMART 26again6 561 588 IPR006564 GO:0008270
Sebi611g00010 948 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 172 662 IPR031052 GO:0006355
Sebi611g00010 948 MobiDBLite consensus disorder prediction 669 702 - -
Sebi611g00010 948 ProSiteProfiles Zinc finger CCHC-type profile. 701 717 IPR001878 GO:0003676|GO:0008270
Sebi611g00010 948 ProSiteProfiles Zinc finger SWIM-type profile. 554 586 IPR007527 GO:0008270
Sebi611g00010 948 SUPERFAMILY Retrovirus zinc finger-like domains 688 719 IPR036875 GO:0003676|GO:0008270
Sebi611g00010 948 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi611g00010 Sebi-Chr611 211410 216445 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi611g00010 FAR1 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi611g00010 - - ccaj:109792835 463.381