LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi610g00037	ATGAGAGGTTTGCATCTGGGTTCAAAGGGCCATGTGGTGGGAAAAGAAACTGATTATGTTCAGCAAGGTAGTTGTCCCTTTGTTTTGGAGGATGATGAGGGAGGTGTCTATGTTGTAGATGAGAATTGGGGCAATAGTTGTGCAGTAGAGGGTGTGGAACATAGTGGTGGTGCACATTTATCAGATAATAACGGTGCATTTGGCGAAGGTTATTTTTGTGACGGTGACAATGGGGGTGTTTTTTTGGTGGGAAAAGATTGGAATGATGAAAATTTGGAAGGTGATGGGGATAATGGTGGAGAGGATAAAATTTTAGTTGATACAAATGATGATATACTTAAGATGGGTGACCTGTCGTTGTTTAGTCCTCATGAAATAGAGAGATATGAATTTGGAAGTGTTGACATAGCATACAAGTTTTATTTTGAATATGGGTTTGCTAATGGGTTTGGGATACGAAAGGGTCGTACTTTGAAAAATAAGAAAACGTTGGAAGAGTATCAGAAAGAGATAATGTGTTGTAGAGCTGGGCAGCGTGAAGACCGTGGTCTTAAAATGGAAGATAGGGTCCGTGAGCCTAGAGCTTTGACTAGGTGTGATTGTAAGGCCAGATTTCATGTTCGTGTCAATATGTTAAGTGGTAGGTGGTTTTGTATTTGTTTCGAAGATGAACACAACCATGATCGTCTCGGTGCAGTGCATTGCAGCATGCTTCCGGTGTACAGGAAAATGTCTGAGAGTGATGTGGTCCAAATGAACAACATGATGAAAGTTGGTATTCGACCACCAAATATATTTAACACGTTTGCTAACCAGTCTGGAGGGTATGAGAAGATAGGTTTTCGGAAGAAAGACATGTATAACAAGATTAGTGAGCAAAGGCGGAGTTTGTGTTCGGATGCCAAAGGAGCTTTGGAATACCTAGGGTTGCTTGGACTAAATTTCACCAAAGGATTTGAGGATTGCATGCTTGGTTATTATGATGTGGGTACGTTCAGAAGAAAGTGGTTGGAACTGGTTGCAAAATGTGAACTTCAAGAGAACACATGGGTGGCTGCTTTATATGAGAAGAGGAATATGTGGGCTACAGCTTACCTTCGTGGAAATTTTTTGGTGGTTTTAGAACTACGTCACGGTGTGAGGGATTGCATTCGGAACTTGGCGAGTGCTGATGAGGGCACAGAATTTGAGTGTAAGTGGTATTTCACAGGCTGTTCGATGTACTATATTTTTAGTAGTCAGCCAAACAGGAAGGAGTGGGGAATGAAGGTTTGTGTGTTGGCTCATCTAAGGATTGATGATATCCCTGAAATGTTGGTCCTTAAAAGGTGGAGCAAGGTTGCTAAGGATGGGTTAGGTTGTAAAGAATTTGAAGCAAATCATTGTGTGGATGTTGCCAGGAGGGCTAGGAAGGCTGCACTAGATGGTTTATATGATCATGTTAGTGATTTTAAGTCTGCAAGCATTGAAAAGTTTAAGGTTGAACGCGACAGACTTGTCGAGGATTGGAGGCAATGTCGGGCTGATTTTGAAAGTGAACAACAGCTGGGATTAGGTGGTCCTAAACACATGATGGTCCAAGGAACCCAACATGTGCTTCAACCAAAGGTCATGCTGGTGGTTCCTCATCTGCAGGCATCAGAACTAGGAAAAAACAAAATTGTTCCATATTGGCTGTGA	1680	0.4196	MRGLHLGSKGHVVGKETDYVQQGSCPFVLEDDEGGVYVVDENWGNSCAVEGVEHSGGAHLSDNNGAFGEGYFCDGDNGGVFLVGKDWNDENLEGDGDNGGEDKILVDTNDDILKMGDLSLFSPHEIERYEFGSVDIAYKFYFEYGFANGFGIRKGRTLKNKKTLEEYQKEIMCCRAGQREDRGLKMEDRVREPRALTRCDCKARFHVRVNMLSGRWFCICFEDEHNHDRLGAVHCSMLPVYRKMSESDVVQMNNMMKVGIRPPNIFNTFANQSGGYEKIGFRKKDMYNKISEQRRSLCSDAKGALEYLGLLGLNFTKGFEDCMLGYYDVGTFRRKWLELVAKCELQENTWVAALYEKRNMWATAYLRGNFLVVLELRHGVRDCIRNLASADEGTEFECKWYFTGCSMYYIFSSQPNRKEWGMKVCVLAHLRIDDIPEMLVLKRWSKVAKDGLGCKEFEANHCVDVARRARKAALDGLYDHVSDFKSASIEKFKVERDRLVEDWRQCRADFESEQQLGLGGPKHMMVQGTQHVLQPKVMLVVPHLQASELGKNKIVPYWL	559

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi610g00037	559	PANTHER	OS01G0519700 PROTEIN	314	370	-	-
	Sebi610g00037	559	Pfam	FAR1 DNA-binding domain	139	228	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi610g00037	Sebi-Chr610	495059	497689	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi610g00037		FAR1	4.3e-16	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi610g00037	-		-	tpra:123914620	196.438