Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi610g00033 ATGCCAGTTGCAAAACTTACAGCCTCTGGCACTCCCAATTTCATGAAAACAGAAGATGGAAATGATTCTTTAGATACCATAATCAGACAAGCAATTGGAAAAGAACCTTTCCTTTCCTTTCCTAGGGCCGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTACAGAAGTGCGACAAGTGTTCTCGAGAGTTTTGCTCTCCCATTAACTATAGAAGACATATACGTGTACACCATCGGTTGAAAAAGCTTGATAAGGACTCTAAAAAAAATAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAATTGTGTCATTCAAGGATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAAAAGCTCTGACAAATCTTAGAAAACAAGGATTTTCTCCTCTACCACAGTATTATCTGAGGGCTGGTTCTGCACTTTTGGATATTGTTCAATCTAGGCCTTCTAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATCCTTGATGATTCCAGTGAGAAAACCTTTTTATGTGGAACAGCGGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGAAAAAGATGTGCCAGTGGAACCAAAGTTCATGGCATATCCTGTATCTACATATACAAACTTAAGACCTGATTCTATTATAACTAATGTGAAACGTGTGTTTCCTAAAGTAATTCTTATTGTCATGATGAAATATGCATTTCCTTTCACACAGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCATTGAGATGCCAGAAGCTTTGGTGGAGGAGGAGGAAGCTGCTCAGAAAAGTTGTTCCCTCTATTTGTAGACAAGCTGAGATTTTAGAGAGGAAACGCCAGAAAAAGCTTAGACAGAAAGAACACAAGGCGAGGGAAAGACTCGTAGATGACTCAGAAATTAAAGGGAACATTAGCAGCACAGGAGAGGATGTATCAGCAGCAGAAGCATCTTTGGCTGAATGTGACTTTGAAGTTAATAATAATCCAGATATATTTGTAGATGATACTCCTTCACCACATGTAACTTATCATTGCCCAGACACTAATGAAGGTGTAGATGGGGACACACAGTCAGGGAATGATTGTGACACTGATCACAATATCGAGCGACAGACATCACAAGGACGTAATCGCCGGCGCATGATGGCTTCCAGACGGCAAGGGCTGCCAAAATCACAATGGGCTATAGCCAATGGTTTGTATGCAAGCCAGAATTCTCAAATGTCAAAGCCTGGAGTTATTCAAAAATATGGAACCAGCCGTGATCAAAGACAGCATAAGGAACCAGATGAAGGTAAGAATCATGAAGTTTTGATAGGATCTGTATCTGTTACACTGGGAAATTGCAGCCAATCAGTCGGTAGTCGTGTGGCATCTCAAGGGGACTGCTCGGTAGAGAATCTGGCCAAACCAATTACTGCTCAGGAGAAGCCAATGAAACTTGAGTCCGTCCAGGGAGGCAACAGTAGGTTTACAGTCAAGCTTTGGAGACCTGTTAGCCAGCATGGAACGAAAGATCCGATGCCACTTCAAAGTAGTTGGACAGAAGCTGATGTTGTTCATGGAAAGGATGATCAAAATTTGTCAGGTCAAAGTAGTTTAAGGTTTTGTAATATAGATGGTAGTGATAATGGATTCGGGAACGACTCCCTTATTGGGGGTAAAGTAGATGGAGAAAGATTACAGATGGAAAGAAGCGATCTCATCAAACATGTGAAATTGGTTGTTTCATCTGATTCTGAACCTCCTGGATCTCAGCGGGTCCAGGACTGTGAACTAGCAGCATGTCAATCTTCTAATGTGGACAGATGTAGCAATCTTGCAAATACAGAGAACCGGTTGCCTGCAACCTCCGGAGTAGCTAAATCCAAACCCAGAATGAAGCCTGAGAAGGGAATCAAGATAAAGTACATTCCCAAACAAAAAGCAGCAGCCTAG 2058 0.4208 MPVAKLTASGTPNFMKTEDGNDSLDTIIRQAIGKEPFLSFPRAELPGWPLLSPVKVQLQKCDKCSREFCSPINYRRHIRVHHRLKKLDKDSKKNRDLLGAYWDKLSVEEAKEIVSFKDVMLEEVPGSSILKALTNLRKQGFSPLPQYYLRAGSALLDIVQSRPSSFPISSQELFSILDDSSEKTFLCGTAVSMQRYIFDGEAGKIGLEPKNLVACTSFLLEQKLEKDVPVEPKFMAYPVSTYTNLRPDSIITNVKRVFPKVILIVMMKYAFPFTQVKAWLADKDAEALRCQKLWWRRRKLLRKVVPSICRQAEILERKRQKKLRQKEHKARERLVDDSEIKGNISSTGEDVSAAEASLAECDFEVNNNPDIFVDDTPSPHVTYHCPDTNEGVDGDTQSGNDCDTDHNIERQTSQGRNRRRMMASRRQGLPKSQWAIANGLYASQNSQMSKPGVIQKYGTSRDQRQHKEPDEGKNHEVLIGSVSVTLGNCSQSVGSRVASQGDCSVENLAKPITAQEKPMKLESVQGGNSRFTVKLWRPVSQHGTKDPMPLQSSWTEADVVHGKDDQNLSGQSSLRFCNIDGSDNGFGNDSLIGGKVDGERLQMERSDLIKHVKLVVSSDSEPPGSQRVQDCELAACQSSNVDRCSNLANTENRLPATSGVAKSKPRMKPEKGIKIKYIPKQKAAA 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi610g00033 685 Coils Coil 312 332 - -
Sebi610g00033 685 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Sebi610g00033 685 MobiDBLite consensus disorder prediction 389 428 - -
Sebi610g00033 685 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 467 - -
Sebi610g00033 685 ProSitePatterns Zinc finger C2H2 type domain signature. 61 82 IPR013087 -
Sebi610g00033 685 SMART c2h2final6 59 81 IPR013087 -
Sebi610g00033 685 MobiDBLite consensus disorder prediction 399 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi610g00033 Sebi-Chr610 444960 450501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi610g00033 18 682 C2H2 Transcription Factor Family AT4G25610 36.503 3.59e-114 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi610g00033 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi610g00033 - - gmx:100799153 833.172