Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi610g00029 ATGGCAGCAGAGGTGGTGAAGAATGAAGAACATCTGAATCTGAAAATCACTGGTAAAAGCCATGTGAAGCCTAACAAGAAAATTGGGAAGAAGGAGTGTCAACTGGTCTCATTTGATCTTCCCTATCTAGCTTTCTACTATAACCAGAAGCTACTTTTTTACAAAGGGGATGCTTTTGAGGGAATGGTGAAGAAACTGAAAGATGGGCTTAGTGTGGTCTTGGAAGATTTCTATCAATTAGCTGGTAAGCTTGGGAAAGATGAGGAGGGTGTGTTCAGAGTGGAATATGATGATGACATGGCTGGTGTGGAGGTCATAGAGGCAGTTGCTGATGAGATTGAGGTAGCATCTCTAATTGTGCCAGAGAGTAACACCACTTTGAAGCAGTTGGTACCTTACACTGGGATCTTTAATTTGGAAGGGATGCACAGGCCCTTGTTGGCAGTTCAGTTAACCCAACTCAAAGATGGACTTGTGATTGGGTGTGCTTTCAACCATGCGGTCCTTGATGGAACCTCTACATGGCACTTTATGAGCTCATGGAGCGAGATATGTCGTGGTGCTCCCTCCACATCAACCTTACCCTTCCTTGAACGAACTAAGGCCCGAAAGACACGTGTGAAGCTCGACCTCACTCTTTCTTCAGGCCCACATCCAACATCTAACGTCGATGCAGAGCCCAAGCTTGAACCACCACTAAGGGAAAAGATCTTCAGGTTTTCTGAATCAGCCATTCAAAAAATCAAGTCAACGATCAATGGAAACCCTCCATCGGATGGCTCAAAGCCATTCTCAACATTCCAGGCCCTCTCAGTTCATATTTGGCGCCACGTGAGCCATGCACGCAACCTTAAATCTGAAGACTACACCGTATTCACTGTCTTTGCAGATTGTCGGAAACGGGTTGACCCGCCAATGCCAGATGCTTATTTTGGAAACTTAATTCAAACCATATTTACCGTCACAACAACGGGGTTATTGTTGACACATCCACCACAATTTGGTGCTTCATTGATACAAAAAGCCATTGAAGGACACAATGCCAAAGCAATTGATGAACGTAACAAAAAGTGGGAAACTACACCAAAGATCTATGAATTCAAAGATGCAGGGGTGAATTCTGTGGTGGTAGGTAGTTCACCAAGGTTTAGGGTTTATGATGTAGACTTCGGATGGGGGAAGCCAAAAAATGTTAGGAGTGGATCCAATAACAAGTTTGATGGGATGATTTATTTGTATCCAGGGAAAAATGGAGGGAACAACATCGACGTGGAGCTAACCTTAGAGGTTGGAGCTATGGGAAGATTGGAGCAAGATAAGGAATTTCTTATGGAGGTTAATTAA 1344 0.439 MAAEVVKNEEHLNLKITGKSHVKPNKKIGKKECQLVSFDLPYLAFYYNQKLLFYKGDAFEGMVKKLKDGLSVVLEDFYQLAGKLGKDEEGVFRVEYDDDMAGVEVIEAVADEIEVASLIVPESNTTLKQLVPYTGIFNLEGMHRPLLAVQLTQLKDGLVIGCAFNHAVLDGTSTWHFMSSWSEICRGAPSTSTLPFLERTKARKTRVKLDLTLSSGPHPTSNVDAEPKLEPPLREKIFRFSESAIQKIKSTINGNPPSDGSKPFSTFQALSVHIWRHVSHARNLKSEDYTVFTVFADCRKRVDPPMPDAYFGNLIQTIFTVTTTGLLLTHPPQFGASLIQKAIEGHNAKAIDERNKKWETTPKIYEFKDAGVNSVVVGSSPRFRVYDVDFGWGKPKNVRSGSNNKFDGMIYLYPGKNGGNNIDVELTLEVGAMGRLEQDKEFLMEVN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi610g00029 447 Gene3D - 11 211 IPR023213 -
Sebi610g00029 447 Gene3D - 216 439 IPR023213 -
Sebi610g00029 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 443 - -
Sebi610g00029 447 Pfam Transferase family 14 442 - -
Sebi610g00029 447 FunFam Tryptamine hydroxycinnamoyl transferase 219 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi610g00029 Sebi-Chr610 386034 387901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi610g00029 66 446 Monolignol Biosynthesis Gene Families AT5G48930 28.822 2.10e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi610g00029 K19747 - gmx:100790669 702.205