Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00183 ATGCACCACAACCTGGCAAGGTTGTGGATTGCTTTGCTTGCGGTATCATTAACCGCAGTTCATTGCAAAACTGCCTCACGAGATGTTTCAGCCCTTAATGTGATGTATACCAGCTTAAATTCGCCTTCACGACTGAGTGGCTGGAAATCAAGCGGAGGTGATCCTTGTGGCGACTCTTGGGAAGGAATCAAATGCTCAGGCTCCTCTGTCACAGAAATAAATTTGTCTGACATGGGACTTACTGGATCAATGGGGTACCAATTGTCGAGCTTAACATCTGTTACCTACTTTGACTTGAGCAACAACAACCTCAAGGGTGATATACCGTATCAACTTCCTCCAAATGCCCATTACATAGATCTTTCTAAGAATGGCTTCACTGGAGATGTACCTTACTCCATTTCTCAGATGAGTGACCTCAACCACCTAAATCTTGCACATAATCGGCTCAATAACCAGTTGGGCGATATGTTTGGGAAACTCACTAAACTAAAACAGCTGGATGTGTCATTCAATTCACTGTCAGGAAACCTACCTCGGAGTTTTAAATCACTCACAAGCCTCAAGAAGTTGCGTCTGGAAAACAATCATTTTTCCGGTTCAGTAAATGTCCTTGCCAACCTTCCACTTGATGATTTGAATATTGAAAATAACAAATTTACTGGTTGGTTCCCTGAGGAGTTAAAGGATATAAATAGCTTGCAAACTGGAGGAAACTCTTGGTCAACTGCACCGGCGCCACCTCCTCCTCCTGGTACACCTCCTGTCAAGCATTCCGTGAAAAAGAGTGAAAAATCTGTTCTTAGTGGAGTAGCTATAGCAGGCATAGTTTTTGGTGTGCTGGTAGTAATTGTAACCATTGTTGCTTTTTCTAAAAGAAGAAGGTCATCTTTACCTTCTTCACATTTTATTGATGAAGAAAGGCACAGCCAGCACAGATCTTTTACTCCCCTTGCATCTCAGGAGTTATCCAAAGATTTGGGTGCTGATGCCAGCAAAGAATACAAAGGTGGATTTGAGTCATTGGATTCCACTTCAATTGACATAAAGGCCTTGCAGAAAACTCCATCAATTAGTGTTAGGTCCTCAGTCTCTGATTGTGTGCAATCCTTTAATGACAATGAGTTTGCAAATCGTCTAAATGCTAGAAGAAGCACATCAATCCGTTGTACTCCCTTTTCATTGGCAGAGTTGCAGACTGGTACTGCTAATTTTGCCTCAGGTCGACTTCTTGGTGAAGGATCTATTGGATGTGTTTATCGAGCCAAATATGCTGAAGGAAAGGTGTTGGCTGTAAAAAAAATCAACGCTTCACTTTTTAATGGTGGTCGTCCTGAGGAATTCTCTCAGATTGTTTCAAACATATGCAAACTTCGTCATCCAAATATTGCTGAGCTTGTTGGTTATTGTTCAGAGCAGGACCACATGTTAATATATGATTATTTCAGAAATGGCTCTCTCCACGACTTTTTACACTTATCAGATGACTTCAGCAAACCACTAACTTGGAACACCAGAGTCAGAATTGCATTGGGAACTGCTCGGGCTGTTGAGTACCTACATGAAATTTGTTCTCCGCCTTTAGTTCACAAGAATATCAAGTCCTCCAATATCTTGCTTGACATGGATCTAAATCCCCGTCTCTCAGACTATGGTTTGGCATCCTTCCACCAGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCGCCAGAATGCACAAAACCATCAGCCTATACCATGAAGAGTGATGTATACAGTTTTGGGGTAGTCATGCTGGAACTTTTGACGGGTCGAATGCCTTTAGACAGTTCAAAGCCAAAACCAGAACAGTGTCTCGTTCGTTGGGCTACCCCACAGCTTCATGACATTAATGCGGTGGAAAAAATGGTGGACCCTGCCTTGCGGGGACTTTACCCTCCTAAATCACTCTTCCGATTTGCTGACATCATTGCCCTTTGTGTTCAGGCTGAGCCCGAATTTCGGCCACCTGTGTCAGAGGTGGTTCAGGCATTGGTGCGATTAGTTCAACGGTCGAGTATGAAAATGAGAGATGATCTTGGAGCCTTTGGTCGGATGGATGATTATGATGACTGA 2097 0.4306 MHHNLARLWIALLAVSLTAVHCKTASRDVSALNVMYTSLNSPSRLSGWKSSGGDPCGDSWEGIKCSGSSVTEINLSDMGLTGSMGYQLSSLTSVTYFDLSNNNLKGDIPYQLPPNAHYIDLSKNGFTGDVPYSISQMSDLNHLNLAHNRLNNQLGDMFGKLTKLKQLDVSFNSLSGNLPRSFKSLTSLKKLRLENNHFSGSVNVLANLPLDDLNIENNKFTGWFPEELKDINSLQTGGNSWSTAPAPPPPPGTPPVKHSVKKSEKSVLSGVAIAGIVFGVLVVIVTIVAFSKRRRSSLPSSHFIDEERHSQHRSFTPLASQELSKDLGADASKEYKGGFESLDSTSIDIKALQKTPSISVRSSVSDCVQSFNDNEFANRLNARRSTSIRCTPFSLAELQTGTANFASGRLLGEGSIGCVYRAKYAEGKVLAVKKINASLFNGGRPEEFSQIVSNICKLRHPNIAELVGYCSEQDHMLIYDYFRNGSLHDFLHLSDDFSKPLTWNTRVRIALGTARAVEYLHEICSPPLVHKNIKSSNILLDMDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAYTMKSDVYSFGVVMLELLTGRMPLDSSKPKPEQCLVRWATPQLHDINAVEKMVDPALRGLYPPKSLFRFADIIALCVQAEPEFRPPVSEVVQALVRLVQRSSMKMRDDLGAFGRMDDYDD 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00183 698 SUPERFAMILY Protein kinase-like (PK-like) 385 672 IPR011009 -
Sebi60g00183 698 SUPERFAMILY L domain-like 26 235 - -
Sebi60g00183 698 Gene3D Transferase(Phosphotransferase) domain 1 482 692 - -
Sebi60g00183 698 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 482 686 - -
Sebi60g00183 698 Gene3D Phosphorylase Kinase; domain 1 367 481 - -
Sebi60g00183 698 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 370 481 - -
Sebi60g00183 698 Gene3D Ribonuclease Inhibitor 23 261 IPR032675 -
Sebi60g00183 698 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 676 IPR046959 -
Sebi60g00183 698 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Sebi60g00183 698 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Sebi60g00183 698 ProSiteProfiles Protein kinase domain profile. 405 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00183 698 Pfam Protein tyrosine and serine/threonine kinase 408 672 IPR001245 GO:0004672|GO:0006468
Sebi60g00183 698 CDD TM_EGFR-like 269 298 - -
Sebi60g00183 698 MobiDBLite consensus disorder prediction 235 261 - -
Sebi60g00183 698 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00183 Sebi-Chr60 2366397 2373421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00183 1 697 Strubbelig Receptor Gene Family AT1G78980 62.465 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sebi60g00183 PK_Tyr_Ser-Thr 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00183 - - psat:127107173 1100.89