Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00180 ATGCATAAAAATGAAAGAGTACCAAGCCAAGTGTTAGTTGATTGTGCGTGTGTGTGCAAGTGCAAAGTTAAAAAAACGCACTCTCTCTATTCTGTTGCGTTCCTAATTAAAACCGATGCGACAGTAAGGAAGAGAGAAATCTTCCGTTTTGTGTGTCTGTGGACTGAGAAAAGCAGCGGAAGGAAGCTAGAGCCAAATTCGGATTCTTCACGAGAACCAACCCGACCGGGTTCAGGGGGTGACTTGCCCCAAGGAGGTGAGTACAACCCTTATCCTGTAGCACGGAGGGTGAATTCGATCCATTCTATAATGATGGATGATGATATGGAGAGCGGTACCTTGGGGTCTTACCAGGACAGGCCAAGAACATTCCCCAACATGCGTAGTAAAGCTTACACCCCACTGATATTTCGTATTCTACTGGGTATAAATGTTCGTGTCCTGTTCATTCTTTTGTTCCTGGGGTTTGGAGCTATCTTTTACATGGGAGCAAGTACATCTCCAATTATTGTGTTTGTCATCTCTATTTGTATTCTCAGCTTCCTTGTTTCAATATATCTTACAAAGTGGGTGCTCGCAAAAGATGAGGGCCCCCCTGAAATGGTTCAGGTAATTGTTGGCTTTGGGGCTCATCGTATTGGAGAAGATGAACAGTTTAGTCAGATTGCTTTTTGGATTAATTGTGAGATATCTGATGCTATACGAGATGGAGCTGAAGGATTTATCAGGACCCAGTATGGGAGTATATCCAAGATGGCGATGTTGCTTGCTCTTGTCATTCTTTGCATATATTTGTTTCGCAGCACAACTCCTCAACAGGAATCTTCTGGCATGGGAAGGTCAACATCTGCATACATCACTGTAGCTGCTTTCCTTTTAGGTGCCCTTTGTTCAGGTATTGCTGGATATATAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTATCTGCTATCACTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCACCAGTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTGGCACTGTTTGCCCAGTTGGGTGGTGGAATATACACTAAAGCAGCTGATGTTGGGGCAGACCTCGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCAAGGAATCCTGCTGTTATTGCTGATTTGGTTGGAGACAATGTGGGTGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAAATAATCAGTGCCATGATACTTGGAGGAACAATGGCACAACGCTATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCGGTTGGGATATTTTCTATTAGGGGTACACGTGAATCTGGAGTAATGGCTCCTATGGAGGATCCGATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACAGCTTACATTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCACGAGCCTGTGCGCATATTAGCCCTTTCTAGCTCTACGGGCCATGGGACCAACATAATTGCCGGAGTCAGTTTGGGCCTGGAATCTACTGCTCTTCCTGTCCTTGTGATCAGTGTATCGATTGTCTCAGCTTTCTGGCTGGGCCACACCTCTGGACTATTAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTGGCAACAATGGGAATGCTTAGCACGGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATTGCTGATAATGCTGGAGGAATTGTAGAGATGAGCCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATGTCCTTGATGCTGTGGGAAATACAACCAAAGCCACCACTAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGCGCTTACATGGATGAGGTTTCTACATTCGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCAGAAGTTTTCGTTGGTGGGTTGCTGGGTTCTATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTCAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATTATGGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCATTACGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAATTGGTTTTCTGTTCCGAATTTTGGGCTACTACACGGGGCACCCCTTACTCGGGGCTAAAGTTGTGGCAGCTTTGCTGATGTTTGCAACAGTGTCTGGTATTCTTATGGCGCTTTTTCTGAACACGGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCGCTTGGAGGAAAAGGAAGTGATGCTCACAAAGCAGCAGTAACAGGAGACACGGTAGGAGATCCATTCAAAGACACCGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACGATTACGCTGGTAATGGCTCCAATCTTCCTGTGA 2760 0.4496 MHKNERVPSQVLVDCACVCKCKVKKTHSLYSVAFLIKTDATVRKREIFRFVCLWTEKSSGRKLEPNSDSSREPTRPGSGGDLPQGGEYNPYPVARRVNSIHSIMMDDDMESGTLGSYQDRPRTFPNMRSKAYTPLIFRILLGINVRVLFILLFLGFGAIFYMGASTSPIIVFVISICILSFLVSIYLTKWVLAKDEGPPEMVQVIVGFGAHRIGEDEQFSQIAFWINCEISDAIRDGAEGFIRTQYGSISKMAMLLALVILCIYLFRSTTPQQESSGMGRSTSAYITVAAFLLGALCSGIAGYIGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAITVVGMAVIGIAVLYATFYVWLGVDSPVPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRYPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMAPMEDPMTILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLLDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVIGFLFRILGYYTGHPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFL 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00180 919 PIRSF H+-PPtase 162 919 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi60g00180 919 MobiDBLite consensus disorder prediction 60 90 - -
Sebi60g00180 919 NCBIfam V-type H(+)-translocating pyrophosphatase 172 918 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi60g00180 919 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 173 918 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi60g00180 919 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 167 919 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Sebi60g00180 919 Pfam Inorganic H+ pyrophosphatase 179 914 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00180 Sebi-Chr60 2319040 2331432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00180 103 919 Primary Pumps ATPases AT1G16780 82.971 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00180 K23025 - gmx:100787805 1381.7