Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00179 ATGGAAGCAGCGAAGGAATATTCAAAGGTTACCAAAGGATACATCGCTGTATATGTTGGGCCACAGTTTCGAAGGTTTGTGATTCCAATAAGCTTCTTGGCCATGCCAGACTTCACGGTTTTGATGGAGACTGTGGCGGAGGAATTTGGATGCGACCATCATGGACATGGTGCTCTCCATATCCCTTGCGATGAACACCATTTTCACCATATTTTGACCACTTGTTTCGCAACAACAACGGATGATATCTTCTAA 255 0.4431 MEAAKEYSKVTKGYIAVYVGPQFRRFVIPISFLAMPDFTVLMETVAEEFGCDHHGHGALHIPCDEHHFHHILTTCFATTTDDIF 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00179 84 Pfam Auxin responsive protein 5 73 IPR003676 GO:0009733
Sebi60g00179 84 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 71 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00179 Sebi-Chr60 2298212 2298466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00179 10 72 Calmodulin-binding Proteins AT3G43120 53.968 2.66e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00179 K14488 - vun:114165672 114.775