Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00166 ATGAAGGACAAGGATAAAGATAAGGAGAAAGACACCGCGGAGAAGAAGAAGTACCCTATCGGTGCTGAGCATTACGTTCTCTACGAGGAGATTGGACAGGGTGTCAGCGCCTCTGTCCACCGCGCTCTCTGTATCCCCTTCAACGAGATCATCGCCATCAAAATTCTCGATTTCGAACGTGACAATTGCGATCTGAATAACGTTTCTCGTGAAGCCCAAACAATGATCCTGGTGGACCACCCTAACGTGCTCAAATCACACTGCTCCTTCGTGAGCGACCATAATCTGTGGGTTGTGATGCCATTCATGGCTGGTGGTTCGTGCCTTCACATATTGAAAGCCGCACACCCTGATGGTTTTGAGGAGGTTGTCATTGCAACCATACTCAGAGAGGTGTTGAAGGGTTTAGAAGCTGACATCTGGTCATTTGGTATAACAGCATTGGAGCTTGCCCATGGTCATGCTCCTTTTTCAAAGTTTCCACCACTGAAGGTACTACTCATGACTCTGCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAGGAAGTTCTCTAAGTCGTTTAAGCAGATGATTGCTAGTTGCTTAGTAAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTGAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAATGATTATATTTCACGAACACTTCTGGAGGGGCTGCCTGCTTTAGGTGACCGCATGCAGGCCCTGAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGAAAATGCCTGATGGGCAGATGGAGGAATTATCACAGAGTGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCCACGATTTTGACGATGCCATATCAGATATGGGTCATGTGGGAAGTTCAAGTTCTTTATCCGCACTTGATGCACAAGATAAGCAACTGCCAAGTGCAAGTCATAACCCTTCTCAAACTGCTGATATGGAGGAAAATGGTGAGATGCAAAATCAATCAGCCGCTGTTCCAGTAGCCGATTCAACAGCAAATGATGCCAAGACAAGACTTGAAAAATCTGATGATGACTCTAGCATCACCAGTTCAAGCCTTATCAATGAACCACAAACTTCTGCTTCCTGTCTTGATGATCATGCGGACCATAATTTGGGTGAAAAATCTTATTTGGAAAATGGTGGAAGATGCATGGAGGGCATGGCTACGCATTCTTTTCACAGAAGAGGATGTTCATCAAGCATCTTACCTGAATGTACTCTTCCCCCTATTCGAGCAGAAAGTGAGAAGCTACAAAATGTGCCCCAGAACATTTCAAGTTGCAATGCACAGACTGGAGAGGATGTGCTTACTGAACTTCCTTCTAGAGTCTCAAAATCTTCAGTTAATTCTGATGACACTGATGAGAAAGCAAAGGTTCCGGTTGTTCAACAGAGAGGACGTTTTAAGGTTACATCTGAGAACGTTGACCCAGAAAAGGTGGCCCCTTCTCCCGTGCTGCAAAAGAGTCACAGCATGCAGGTTGGTGGTTCTGAGGTTTTCAGCCAGCATAATGCTACTCCTCCTCTACATTCAACTTTACCATTGTTATCAGCACCTGATGCTTCGTCATCAAATATTTCTGGCGGTTCTCTTTTCCCCGTGTTGCATTCTGTGCTGCAGACAAATATTCTTCAAAGGGAGAGCATTCTCAGTTTAATGAAGCAAATTACTGCGGGTGACTCTACAGCTGACGGCGTAAGTACCCCAGCACAGGTAGCAGCAATTGAGAAATCTTTGCTTGAAGCAGCTCACGATAGGGAGAAGGAGTTACTTCATGAGATAACTGAGTTGCAGTGGAGGCTCATATGTACCCAGGAGGAGCTTCAAAAGTTAAAAACAGAAAACGCCCAGGTGTGA 1920 0.4516 MKDKDKDKEKDTAEKKKYPIGAEHYVLYEEIGQGVSASVHRALCIPFNEIIAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLHILKAAHPDGFEEVVIATILREVLKGLEADIWSFGITALELAHGHAPFSKFPPLKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSNDYISRTLLEGLPALGDRMQALKRKEEDMLAQKKMPDGQMEELSQSEYKRGISGWNFNLEDMKAQASLIHDFDDAISDMGHVGSSSSLSALDAQDKQLPSASHNPSQTADMEENGEMQNQSAAVPVADSTANDAKTRLEKSDDDSSITSSSLINEPQTSASCLDDHADHNLGEKSYLENGGRCMEGMATHSFHRRGCSSSILPECTLPPIRAESEKLQNVPQNISSCNAQTGEDVLTELPSRVSKSSVNSDDTDEKAKVPVVQQRGRFKVTSENVDPEKVAPSPVLQKSHSMQVGGSEVFSQHNATPPLHSTLPLLSAPDASSSNISGGSLFPVLHSVLQTNILQRESILSLMKQITAGDSTADGVSTPAQVAAIEKSLLEAAHDREKELLHEITELQWRLICTQEELQKLKTENAQV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00166 639 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00166 639 MobiDBLite consensus disorder prediction 304 348 - -
Sebi60g00166 639 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 138 634 IPR047173 GO:0043539
Sebi60g00166 639 Gene3D Phosphorylase Kinase; domain 1 13 102 - -
Sebi60g00166 639 MobiDBLite consensus disorder prediction 304 387 - -
Sebi60g00166 639 MobiDBLite consensus disorder prediction 366 385 - -
Sebi60g00166 639 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Sebi60g00166 639 Pfam Protein kinase domain 25 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00166 639 FunFam Serine/threonine-protein kinase BLUS1 14 102 - -
Sebi60g00166 639 Gene3D Transferase(Phosphotransferase) domain 1 119 231 - -
Sebi60g00166 639 SUPERFAMILY Protein kinase-like (PK-like) 23 217 IPR011009 -
Sebi60g00166 639 Coils Coil 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00166 Sebi-Chr60 2172557 2180719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00166 14 621 MAP Kinase Kinase Kinase Kinase AT1G79640 52.609 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Sebi60g00166 Pkinase 1.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00166 K08835 - gmx:100780339 793.112