Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00153 ATGGAAAGCAAGGAGAATCTTGAAGCCATCAGAACGTACTTGACCACTAGCTTGGAAACATCAATCGCTATTGCTTCTGCATTAGATGAGTCTGGATCAAGATTGGAGCTACTTAACCAGAGATGTCTCTCCTTGCAAGCTTCACTTAAACCCATCTCCATGCAGAAGTGTTCATTTGTTGACATTTGCCATGGTATAGACAGTGTTCTATGTTCTGCTACTGCTGTCCTCAAGGTTTTTGATTCCCTTCATCAGTTGGAGGATTCTCTCTTGACAGACCCCACTTCTGATCTATGCACATACATCTCAGACACAAAGAAACTAGAAGAAGCACTGAAGCTTCTCACTGATAATTGCAGGTTAGCAGTTGGCTGGTTGAAGAGTGTTTTTGAGTTCTTACAAGACAAAGCAATCACCAATGAGATTTACCTATTGAATATAAAGAAATCCTTGAGAATATTGCATGTCATAGAGGAAGGTGCTCGCCATGATGGAGGCCTTCTCAGTACTGCCTTTGACAAACTAGAGATTGTGTTCCACAGGCTTCTGATGGCAAACTCCATGCCTCTTCCTTTGGTTTCATTAACATCACACAATGGCCACCAAGGCAGCATCACCACACAATCTCTGCCACTGCCAGGTGAATTTGAGAGTGTGCAGGGTATGGAGAGTTACATAGACCAATGGGGTAGCCATTTGGAGTTGGTTGTGAAACAACTGTTGGAGGTTGAGTACAGGCTTTCTACTAATGTCTTTGAGACAATTGGTCCAGAAGCATGGATGGGGTGTTTTGCAAAGATTGCCATTGAATCAGGAATTCTTTCTTTTATTCGATTTGGAAGGGTTGTTGCTGAGAGGAAAAATGACCCCTTCAAGACTGTGACAAAGGATCTTATCAACAAAGTTGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAGCACAAGTGAAGTTGCAAAGGCCAAGTTCTCCTCCCCCAGATGGCAGTGTTCCTAGGCTGGTAAGCTTTGTAACTGATTATTGCAATCAGCTGCTTGGAGATGCATATAGGCCACACTTGACACAGGTTTTGGAAATACATCTCAGTTGGAGAGAGGAAGCATATGAAGAGGGTGTTGTTTTCACCCAAATATATAACATCATCAAGGAAGTTGCTGTAAATTTGGATGCTTGGTCAAAGGCATATGAAGATATCACTTTGTCATACCTTTTTATGATGAATAATCACTGCCATTTCTACAATTTAAGGGTTCAAAAGGACATACTTTCATCCTCTGAGGGGAAAGTGACTACCCAAGATTTGGGTAGGAGACTAACCGCTTTCAATATAGCTTTTGAAGAAAAGTACAAAAAGCAATCTAATTGGGTAATCTCCGATGAGATCTTGAGGGAAAATGTGTGCAAGCATTTGGTGGAAGCCCAAATTGAGGAAGCATGGTAG 1443 0.42 MESKENLEAIRTYLTTSLETSIAIASALDESGSRLELLNQRCLSLQASLKPISMQKCSFVDICHGIDSVLCSATAVLKVFDSLHQLEDSLLTDPTSDLCTYISDTKKLEEALKLLTDNCRLAVGWLKSVFEFLQDKAITNEIYLLNIKKSLRILHVIEEGARHDGGLLSTAFDKLEIVFHRLLMANSMPLPLVSLTSHNGHQGSITTQSLPLPGEFESVQGMESYIDQWGSHLELVVKQLLEVEYRLSTNVFETIGPEAWMGCFAKIAIESGILSFIRFGRVVAERKNDPFKTVTKDLINKVVNGASEIFWQLPAQVKLQRPSSPPPDGSVPRLVSFVTDYCNQLLGDAYRPHLTQVLEIHLSWREEAYEEGVVFTQIYNIIKEVAVNLDAWSKAYEDITLSYLFMMNNHCHFYNLRVQKDILSSSEGKVTTQDLGRRLTAFNIAFEEKYKKQSNWVISDEILRENVCKHLVEAQIEEAW 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00153 480 Gene3D Exocyst complex component Exo70 133 477 - -
Sebi60g00153 480 Pfam Exo70 exocyst complex subunit 288 415 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi60g00153 480 Pfam Exo70 exocyst complex subunit 428 472 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi60g00153 480 SUPERFAMILY Cullin repeat-like 76 472 IPR016159 -
Sebi60g00153 480 PANTHER EXOCYST COMPLEX PROTEIN EXO70 219 413 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00153 Sebi-Chr60 2030611 2032543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00153 5 474 EXO70 exocyst subunit family AT4G31540 38.206 4.58e-133 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00153 K07195 - gmx:121175138 689.108