Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00148 ATGACTCTGTCTCCTGCCTCCAACGGCCACCTCACCGTTTCCATCTCCACCGGCCACCCTGACACCGACGACCTCCCTCCCTCCGGCAACAATCCCCAAGATGACGACGAAGAACTCGCTGATCCCGATGATCCTTTCGACATTACACAAACCAAGAATGCATCGCACGAGACGCTCAGGCGCTGGAGACAAGCAGCACTTGTGCTCAATGCGTCCAGGCGTTTTAGATATACTCTGGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCACTGCTTTTCAGATTGGCCGGTGAACGTGAACTAGTGATAAGTACAGCAGCGACTCCTGCAACTCCAGTTGCAGTTGGTGACTATGCAGTTGGGCTAGAACAACTTGCTTCAATGTCTAAGGATCAGAATATTTCTGTTTTACAACAATATGGAGGGATTAAAGGGTTATCAAATTTACTAAAATCAAATGCGGATAAAGGAATTAGTGGAGATGAAGCTGATTTATTGAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGGAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATATTAATTATAGCAGCTGCAGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGATGAAGGATGGTATGATGGGGGAAGCATTGCATTTGCAGTTTTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTCAGAATTTGAATGCAGAGAAACAAAATATACAATTAGAGGTCATTAGAGGTGGGAGAACAATTAAAATATCGATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACCGGCCATTCACTTGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATCACAAAGCACCCTTTTTGATGTCTGGTTGCAAAGTTGCAGATGGAGTTGGTGTCATGCTGGTAACTGGTGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAAGTATTTCTGAGGACACCGGAGAAGAGACTCCATTACAGGTGCGTTTGAATGGAGTAGCAACTTTTATTGGTATAGTTGGGCTTAGTGTAGCAGTTTTAGTGCTTGCAGTCCTCTTGGGCAGATACTTTTCTGGCCATACAAAAGATTTATATGGAAATCCTGAATTTGTTGCCGGTAAGACTAGCATTAGCAATGCAATAGATGGGGTCATCAAAATTTTTACCATTGCAGTTACAATTGTGGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACTTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCCTTGGTACGGAGGTTGTCAGCCTGCGAAACTATGGGCTCTGCTACAACAATTTGCAGTGATAAGACAGGAACATTGACCTTAAATCAGATGACTGTCGTCGAGGCATATGTTGGGAGGACAAAACTAAATCCACCAGATGACTCATCAAAGTTGCATCCAGAAGTATTATCTCTGATAAATGAGGGCATTGCACAGAATACAACTGGAAATGTTTTTGTGCCTAAGGAAGGCGGAGAGGCAGAGGTGTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGCATGAATTTCGGTCTTATCAGATCAACTTCAACAGTTCTTCACGTCTTCCCATTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCCCTGAAGCTGGTGGACTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAGATAGTTCTAGGATCATGTACTCAATATCTTGACTCAAATGGTCACTTGCAATCCATTGGAGAAGAGAAGGCATTTTTCAAGGAGGCTATTGATGACATGGCTGCTCGCAGCCTGCGTTGTGTTGCCATTGCATACAGATCTTATGAATTAGACAAAGTTCCATCTAATGAGGAGTTAGACCAATGGTCCTTGCCAGAACATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCTGTGAAAGTATGCACTGATGCTGGTGTTAAGGTACGCATGGTTACTGGGGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCAAATGAAGATGCTGTTGAACCAAATATAATTGAAGGAAAGAAATTCCGTGAGCTATCTGAAAAAGAAAGGGAACAGGTTGCCAAGAAAATTACGGTGATGGGAAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCACTACGTAAGGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTAGATGATAACTTTGCATCTGTAGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTTACTGTTAATGTTGCTGCCCTTGTAATAAATGTTGTGGCAGCAATATCATCTGGTGATGTTCCATTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTTGCACTGGCTACTGAACCACCAACAGACCACCTAATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTTATAACGAATATCATGTGGAGAAACTTGTTCATTCAGGCTGTCTATCAAATCATTGTTCTTCTTGTTCTTAACTTCTGCGATGAAAGTCTTCTGCCTAAACAAGATACTAGAGCTCATGCCTTTCAAGTGAAGAATACTTTAATATTCAATGCATTCGTCATGTGCCAAATATTCAACGAGTTCAATGCTCGGAAACCAGATGAGATGAATGTCTTCCGAGGAGTGACTAAGAACCGTCTCTTCATGGGAATTATTGGAATTACTTTTATACTTCAGGTGAATAGGCAACCTTTTGTTATTGTATAA 3042 0.4234 MTLSPASNGHLTVSISTGHPDTDDLPPSGNNPQDDDEELADPDDPFDITQTKNASHETLRRWRQAALVLNASRRFRYTLDLKKEEEKEQKKSLIRAHAQVIRAALLFRLAGERELVISTAATPATPVAVGDYAVGLEQLASMSKDQNISVLQQYGGIKGLSNLLKSNADKGISGDEADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLDEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKAPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVLVLAVLLGRYFSGHTKDLYGNPEFVAGKTSISNAIDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRTKLNPPDDSSKLHPEVLSLINEGIAQNTTGNVFVPKEGGEAEVSGSPTEKAILSWAVKLGMNFGLIRSTSTVLHVFPFNSEKKRGGVALKLVDSGVHIHWKGAAEIVLGSCTQYLDSNGHLQSIGEEKAFFKEAIDDMAARSLRCVAIAYRSYELDKVPSNEELDQWSLPEHELVLLAIVGIKDPCRPGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILASNEDAVEPNIIEGKKFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLFIQAVYQIIVLLVLNFCDESLLPKQDTRAHAFQVKNTLIFNAFVMCQIFNEFNARKPDEMNVFRGVTKNRLFMGIIGITFILQVNRQPFVIV 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00148 1013 SMART Cation_ATPase_N_a_2 153 227 IPR004014 -
Sebi60g00148 1013 MobiDBLite consensus disorder prediction 1 29 - -
Sebi60g00148 1013 FunFam Calcium-transporting ATPase 205 262 - -
Sebi60g00148 1013 Pfam E1-E2 ATPase 274 475 - -
Sebi60g00148 1013 FunFam Calcium-transporting ATPase 252 373 - -
Sebi60g00148 1013 MobiDBLite consensus disorder prediction 30 44 - -
Sebi60g00148 1013 Pfam Ca2+-ATPase N terminal autoinhibitory domain 43 86 IPR024750 GO:0005516
Sebi60g00148 1013 Pfam Cation transport ATPase (P-type) 554 631 - -
Sebi60g00148 1013 SUPERFAMILY Calcium ATPase, transduction domain A 275 370 IPR008250 -
Sebi60g00148 1013 PANTHER CATION TRANSPORTING ATPASE 116 1005 - -
Sebi60g00148 1013 Gene3D - 205 521 - -
Sebi60g00148 1013 PRINTS P-type cation-transporting ATPase superfamily signature 497 511 - -
Sebi60g00148 1013 PRINTS P-type cation-transporting ATPase superfamily signature 696 707 - -
Sebi60g00148 1013 PRINTS P-type cation-transporting ATPase superfamily signature 808 820 - -
Sebi60g00148 1013 PRINTS P-type cation-transporting ATPase superfamily signature 321 335 - -
Sebi60g00148 1013 PRINTS P-type cation-transporting ATPase superfamily signature 718 728 - -
Sebi60g00148 1013 NCBIfam HAD-IC family P-type ATPase 433 522 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi60g00148 1013 Gene3D - 550 705 IPR023299 GO:0000166
Sebi60g00148 1013 Gene3D - 796 1007 - -
Sebi60g00148 1013 PRINTS Sodium/potassium-transporting ATPase signature 490 511 - -
Sebi60g00148 1013 PRINTS Sodium/potassium-transporting ATPase signature 616 634 - -
Sebi60g00148 1013 PRINTS Sodium/potassium-transporting ATPase signature 240 260 - -
Sebi60g00148 1013 ProSitePatterns E1-E2 ATPases phosphorylation site. 499 505 IPR018303 -
Sebi60g00148 1013 NCBIfam calcium-translocating P-type ATPase, PMCA-type 143 1005 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sebi60g00148 1013 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 504 700 IPR023299 GO:0000166
Sebi60g00148 1013 Gene3D - 54 108 - -
Sebi60g00148 1013 FunFam Calcium-transporting ATPase 507 703 - -
Sebi60g00148 1013 Pfam Cation transporting ATPase, C-terminus 869 1005 IPR006068 -
Sebi60g00148 1013 FunFam Calcium-transporting ATPase 9 plasma membrane-type 351 521 - -
Sebi60g00148 1013 SUPERFAMILY HAD-like 495 889 IPR036412 -
Sebi60g00148 1013 Gene3D - 159 348 - -
Sebi60g00148 1013 FunFam Calcium-transporting ATPase 801 1010 - -
Sebi60g00148 1013 MobiDBLite consensus disorder prediction 1 55 - -
Sebi60g00148 1013 SUPERFAMILY Calcium ATPase, transmembrane domain M 154 1005 IPR023298 -
Sebi60g00148 1013 FunFam Calcium-transporting ATPase 54 110 - -
Sebi60g00148 1013 Pfam Cation transporter/ATPase, N-terminus 155 222 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00148 Sebi-Chr60 1977351 1992128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00148 4 1005 Primary Pumps ATPases AT3G21180 75.367 0.0 1530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00148 K01537 - gmx:100777143 1686