Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00132 ATGGTTTTCTTACAAACCTTGTTCTTCCTTTTACTTGTACACCCGATTTTAACATTTGGTCACCCTTCTCATTCTTTGCAAACAGATAAAGCTGCTCTTCTGGAATTCAAAAGAACAATCATATCTGATCCAAATTCCTCACTTGCTAACTGGGATGAAGCTATTCATGTTTGCAACTTCACAGGTGTTGAATGTGATGAATTCCACCACCGTGTCATACGACTACTCCTGTATGATAACCATCTTGTGGGGCCTTTTTCACCTGTCCTTTCCAATCTCACTGGACTTCACATCATTGAGATTGTTAACAGTCACTTGTTTGGCATCATTCCACCAGAGTTATCCTCCCTCACACGTCTCCACCATATCCGTCTTCAAGGGAACAATTTGCATGGTTCCATACCACACTCCTTTTCTCAGCTTTCCAAGCTTAGACTTCTACATATTAAAGAAAGTCATTTAACAGGTTCACTTCCTCCATCTCTCTTTTCCAATTGCACTCTATTGGACAATGTGGACCTTTCTAGCAATTCCCTCAGTGGTAGAATCCCTCAAGAGATTGGAAATTGTCATGCCCTGTGGAGTCTCACTTTATACAACAATCACTTCACTGGACACCTTCCAATCTCTTTGACTAATCTATCAATTGAAAACATAGATGTGGAGTACAATTATCTTTCAGGTGAATTGCCAACAAAGTTAGTAACTAACTGGCCTTATCTTGTTTACCTTCAGCTGTCATACAACAACATGACAAGTCATGATAACAATACCAATCTTGATCCATTTTTCATTGCTCTTAGAAACAGCACTGCTCTAGAGGAGCTTGAATTGGCAGGCATGGACCTTGGGGGAAGGTTCTCCAATACTGTGGTCAGCCAACTTGCCCCAAGTCTAAGAACTTTACTACTTCAGGAAAACCAAATATTTGGATCAATTCCTCATTCCATAGCAAATCTTTCTAGTCTTTCCATCCTCAATTTAACATTCAATCTTCTAAATGGAACTATTTCACATGAGATCTGTAGTTTACCATACTTGGAACAGCTTTTCTTATCACACAACCTGTTCAAAACTTCAATTCCAGAAGCACTGGGCAATTGTCCACATCTGGGTTTACTAGATCTGTCACACAATGAATTTTCAGGTAGGATTCCAGAAAGTTTGGGAAATTTGGTTAGACTAAATTATTTGTTTCTCAACAATAACCTTCTCTCAGGAACAATACCTTGTACATTTGGAAAGTGCACTAATCTTTACAAGCTTGACTTGTCCTATAATAGATTAACAGGAAGCATCCCACAGAATCTCTCAGGCCTGCATGAAATCAGAATCTTCATAAATCTTTCACATAATCACCTTGAAGGCCCGCTTCCAATTGAGCTCAGCAAACTAGAAAAGGTTCAGGAGATAGACCTTTCATCCAATTACCTCACAGGAAGAATATTCCCTCAGATAGCAAGCTGCATTGCAGTTTCATTCATAAATTTTTCAAACAATCTTCTTCAAGGTAAACTACCAGAATCCTTAGGTAATCTGAAGAACCTTGAATCTTTTGATGTTTCAAGAAATCAACTATCTGGATTGATACCAGAAACACTTGCTACAATTGACACACTTACTTTCCTCAATTTATCATTTAACAACCTGGAAGGAGTGATTCCATCTGGTGGTATCTTTAATTCAGTGTCATTTTTGTCATTCTTAGGAAACCCACATGTGTGTGGGAATATTACAGGCATGTCTTTGTGCTCTCAAGGGAGACAGTGGTTCCACACCCGTCTGTTCTTGATTGTGTTAATTTTAGTAATCTCCATATCAACTTTCTTGTCAACAATTTGTTGTGTCACTGGATGCAAGCATCTTAAAGGAATCATCTACTCTAATGAGACTGAGACAGGTAAAAAACAAGTTAGACCAGAGTTCATATCTAACTTCCCAAGAATCACATATAAGGAGTTATCAGATGCCACAAGAGGATTTGATATTGAGAGACTAGTTGGATCAGGTAGATTTGGACATGTCTTCAGGGGAGTTCTTCTAGATGGGACACCAATAGCAGTGAAAGTGCTGCATTTGCAATCTGGAAATTCCACTAAGAGCTTTAACCGAGAATGCCAAGTTTTAAAGAGAATTAGGCACAGGAATCTTATAAGGATTATCACAGCATGCAGTCTACCTGATTTTAAGGCTCTAGTTCTACCTTATATGGCCAATGGAAGCTTGGAGAGCCGCCTTTATCCTTCTTCTGGATCACCAGACTTGAGTATTATCCAGAGGGTGAATATTTGCAGTGACATAGCTGAAGGGATGGCCTATTTGCATCATCATTCCCCTGTCAGAGTGATACACTGTGATCTAAAACCAAGCAATGTGCTTCTCAATGATGACATGACAGCTCTAGTTTCTGATTTTGGCATTGCAAGGTTAATTATGAATGTTGGAGAAGGAAATGGTGGGGTTGTTACTAACATGGGGAACTCTACTGCAAATTTTTTGTGCGGATCCATTGGATACATTGCACCAGCTACAAGAGATCAATCTCAGGAGGTAAAGAAAATGTGGGAAATTGCAATTGGGGAGTTAATTGAGCTTGGGATCCTGTGCACACAGGATTCACCTTCTACAAGGCCTACCATGCTTGATGCAGCAGATGACTTGGATCGTCTCAAGAGATACCTTACTGGGGACACAACTTTAACTTTTGCCTCATCTCTTGGAATTTCATCTTCCACTTTTGGTGATTATTAA 2751 0.3944 MVFLQTLFFLLLVHPILTFGHPSHSLQTDKAALLEFKRTIISDPNSSLANWDEAIHVCNFTGVECDEFHHRVIRLLLYDNHLVGPFSPVLSNLTGLHIIEIVNSHLFGIIPPELSSLTRLHHIRLQGNNLHGSIPHSFSQLSKLRLLHIKESHLTGSLPPSLFSNCTLLDNVDLSSNSLSGRIPQEIGNCHALWSLTLYNNHFTGHLPISLTNLSIENIDVEYNYLSGELPTKLVTNWPYLVYLQLSYNNMTSHDNNTNLDPFFIALRNSTALEELELAGMDLGGRFSNTVVSQLAPSLRTLLLQENQIFGSIPHSIANLSSLSILNLTFNLLNGTISHEICSLPYLEQLFLSHNLFKTSIPEALGNCPHLGLLDLSHNEFSGRIPESLGNLVRLNYLFLNNNLLSGTIPCTFGKCTNLYKLDLSYNRLTGSIPQNLSGLHEIRIFINLSHNHLEGPLPIELSKLEKVQEIDLSSNYLTGRIFPQIASCIAVSFINFSNNLLQGKLPESLGNLKNLESFDVSRNQLSGLIPETLATIDTLTFLNLSFNNLEGVIPSGGIFNSVSFLSFLGNPHVCGNITGMSLCSQGRQWFHTRLFLIVLILVISISTFLSTICCVTGCKHLKGIIYSNETETGKKQVRPEFISNFPRITYKELSDATRGFDIERLVGSGRFGHVFRGVLLDGTPIAVKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESRLYPSSGSPDLSIIQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGIARLIMNVGEGNGGVVTNMGNSTANFLCGSIGYIAPATRDQSQEVKKMWEIAIGELIELGILCTQDSPSTRPTMLDAADDLDRLKRYLTGDTTLTFASSLGISSSTFGDY 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00132 916 ProSiteProfiles Protein kinase domain profile. 661 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00132 916 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 642 736 - -
Sebi60g00132 916 FunFam Os07g0541700 protein 737 821 - -
Sebi60g00132 916 FunFam LRR receptor-like serine/threonine-protein kinase EFR 290 589 - -
Sebi60g00132 916 Pfam Protein kinase domain 662 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00132 916 Pfam Leucine rich repeat 297 356 IPR001611 GO:0005515
Sebi60g00132 916 Pfam Leucine rich repeat 394 454 IPR001611 GO:0005515
Sebi60g00132 916 SUPERFAMILY L domain-like 291 576 - -
Sebi60g00132 916 SMART LRR_typ_2 513 536 IPR003591 -
Sebi60g00132 916 SMART LRR_typ_2 344 368 IPR003591 -
Sebi60g00132 916 SMART LRR_typ_2 117 140 IPR003591 -
Sebi60g00132 916 SMART LRR_typ_2 392 415 IPR003591 -
Sebi60g00132 916 SMART LRR_typ_2 416 440 IPR003591 -
Sebi60g00132 916 SMART LRR_typ_2 141 165 IPR003591 -
Sebi60g00132 916 PANTHER OS04G0122200 PROTEIN 267 845 - -
Sebi60g00132 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Sebi60g00132 916 Gene3D Phosphorylase Kinase; domain 1 642 736 - -
Sebi60g00132 916 Gene3D Transferase(Phosphotransferase) domain 1 737 854 - -
Sebi60g00132 916 ProSitePatterns Protein kinases ATP-binding region signature. 667 689 IPR017441 GO:0005524
Sebi60g00132 916 Gene3D Ribonuclease Inhibitor 143 216 IPR032675 -
Sebi60g00132 916 Gene3D Ribonuclease Inhibitor 28 142 IPR032675 -
Sebi60g00132 916 SMART serkin_6 661 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00132 916 ProSiteProfiles Leucine-rich repeat profile. 418 441 IPR001611 GO:0005515
Sebi60g00132 916 SUPERFAMILY Protein kinase-like (PK-like) 637 887 IPR011009 -
Sebi60g00132 916 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Sebi60g00132 916 FunFam Leucine-rich repeat receptor-like protein kinase 26 185 - -
Sebi60g00132 916 Gene3D Ribonuclease Inhibitor 217 585 IPR032675 -
Sebi60g00132 916 SUPERFAMILY L domain-like 27 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00132 Sebi-Chr60 1784440 1787634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00132 27 879 Receptor kinase-like Gene Family AT3G47570 33.261 8.36e-135 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi60g00132 Pkinase 5.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00132 - - gmx:100815766 1281.16