Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00127 ATGGTGCGGCCGGCGGAGGAGGTGGCGCGGCGGAGAGTGTGGAACTCGAACGTGGACCTGGTGGTGCCCAATTTTCACACGCCCAGCGTATACTTCTACAGGTCCAACGGCGCCTCCAACTTTTTCGACGCCAAGGTTCTCAAAGAGGCTCTCAGCAAGGTGCTCGTCCCCTTTTATCCAATGGCTGGCCGCCTCCGCCGCGACGAAGACGGCCGCGTCGAGATTGACTGCGACGGCCAAGGAGTGCTCTTCGTCGAGGCCGACACCGGCGCCGTCATCGACGATTTCGGCGACTTCGCGCCAACCCTTCAGCTCCGGCAGCTTATCCCAGCCGTCGATTATTCACACGGAATCGAAACCTATCCCCTATTAGTGTTGCAGGTAACACATTTCAAATGTGGTGGAGTGTCACTGGGTGTTGGCATGCAACATCATGTAGCAGATGGGGCTTCTGGTCTTCACTTCATTAACACATGGTCAGATGTGGCTCGTGGCTTGGATGTTTCCATCCCACCATTCATTGACCGGACACTACTCCGTGCCAGAGATCCACCTCGACCTGTCTTTGATCACATTGAATACAAGCCCCCACCATCCATGAAGACTCCTCCACAACCCACAAAACCAGGCTCAGACAGTGCAGCAGTCTCTATTTTCAAACTGACCCGTGAACAACTCAACACACTGAAAGCTAAGTCCAAAGAAGATGGCAACACAATCAACTACAGCTCTTATGAGATGTTGGCTGGTCATGTGTGGAGAAGTGTATGCAAGGCAAGAGCACTTCCTGATGATCAAGAGACCAAATTGTACATTGCAACTGATGGACGGTCAAGGTTGCAACCTCCCCCTCCACCAGGTTACTTTGGTAATGTGATCTTCACAACCACACCTATTGCTGTGGCAGGTGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACAATGCCTTGTCACGAATGGATAACGAATACCTGAGATCTGCTCTTGACTATCTAGAGCTACAACCTGATCTTAAAGCTCTTGTTCGTGGGGCACATACTTTCAAGTGTCCAAATCTTGGTATCACTAGCTGGGTTAGGCTTCCAATTCATGATGCTGACTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTGCATATGAGGGGCTATCTTTCATAATTCCAAGCTCAACAAATGATGGGAGCTTATCTGTGGCAATAGCTCTTCAGCCTGAGCATATGAAAGTGTTTAAGGAGTTTTTGTATGACATTTGA 1275 0.5012 MVRPAEEVARRRVWNSNVDLVVPNFHTPSVYFYRSNGASNFFDAKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLQLRQLIPAVDYSHGIETYPLLVLQVTHFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRARDPPRPVFDHIEYKPPPSMKTPPQPTKPGSDSAAVSIFKLTREQLNTLKAKSKEDGNTINYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRSRLQPPPPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALSRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQPEHMKVFKEFLYDI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00127 424 MobiDBLite consensus disorder prediction 188 213 - -
Sebi60g00127 424 Gene3D - 1 196 IPR023213 -
Sebi60g00127 424 Gene3D - 204 424 IPR023213 -
Sebi60g00127 424 Pfam Transferase family 1 419 - -
Sebi60g00127 424 FunFam Spermidine hydroxycinnamoyl transferase 1 194 - -
Sebi60g00127 424 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 421 - -
Sebi60g00127 424 FunFam Tryptamine hydroxycinnamoyl transferase 201 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00127 Sebi-Chr60 1758211 1761517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00127 1 424 Monolignol Biosynthesis Gene Families AT5G48930 79.245 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00127 K13065 - gmx:100820075 815.839