Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00126 ATGGGGATATACCTCAGCGCCCCGAAAACAGAGAAGGCCTCTGAAGATGGAGAGAACGACAGGCTTCGCTACGGTTTGTCTTCCATGCAGGGCTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTCATCTGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCATGGAGGCAAAGCAGTTTCAAAATTTTGTGCGAAGTATCTTCATCAGCAGGTGCTGAAGCACGAAGCTTACGTAGCTGGAGATATAGGCACATCATTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCAAGTTGATGATTGGGCTTTTGAGGAGGGACCTCATTCAGATTTCAGTGGACCAAACTGTGGAAGCACAGCTTGTGTATCCGTCATCCGAGGAAACAAACTTGTTGTCGCAAATGCTGGTGATTCTAGATGTGTTTTATCAAGGAAGGGGCAGGCACACAATTTGTCTAAAGATCACAAGCCTGACCTGGAGGCTGAAAAAGACAGGATTCTAAAAGCTGGTGGTTTTATCCAAGTTGGACGGGTCAATGGAAGTTTGAACTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAAAACAAATATTTGCCTGCTGAAAAGCAGATTGTGACTGCTGATCCGGACATAACTACAGTTGAGCTTTGTGATGATGATGAGTTTCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCTAGCCAGCAGCTTGTGGACTTTATACACGCACAGTTAAAAACAGAGAATAAACTTTCTGTAGTTTGTGAGAAGGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTTAAAAATCCTTGGAATCCAGATGCTTCTGTCACAAACCAGCCTCAGCCGTCTGCTCAATCCTCTGAAGCTGATAGAAATTCAGAGAAAATAGAATTAAAGTGA 1086 0.4392 MGIYLSAPKTEKASEDGENDRLRYGLSSMQGWRASMEDAHAAHLYLDESTSYFGVYDGHGGKAVSKFCAKYLHQQVLKHEAYVAGDIGTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANDQVDDWAFEEGPHSDFSGPNCGSTACVSVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDITTVELCDDDEFLVIACDGIWDCMSSQQLVDFIHAQLKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNPWNPDASVTNQPQPSAQSSEADRNSEKIELK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00126 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Sebi60g00126 361 Gene3D - 1 329 IPR036457 -
Sebi60g00126 361 CDD PP2Cc 23 328 IPR001932 -
Sebi60g00126 361 MobiDBLite consensus disorder prediction 335 361 - -
Sebi60g00126 361 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Sebi60g00126 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Sebi60g00126 361 MobiDBLite consensus disorder prediction 335 351 - -
Sebi60g00126 361 Pfam Protein phosphatase 2C 142 313 IPR001932 -
Sebi60g00126 361 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Sebi60g00126 361 SMART PP2C_4 13 326 IPR001932 -
Sebi60g00126 361 PANTHER PROTEIN PHOSPHATASE 2C 18 327 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00126 Sebi-Chr60 1739390 1744079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00126 1 334 PP2C-type Phosphatase Gene Family AT2G25070 76.716 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00126 K17499 - gmx:100776787 679.093