Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00124 ATGCCTTCAAGACCCATCCCTCCTCCAAGTCCCAGTTTTGTCACCAAAACCAGGGTTCTGTTCCTGGCACTCACCATCTCAGCATCTGTTGTGATCTTCTGCTCACTCCTTTACTTCCTATACCATCTGTGGCACTCACTTGTACACAGAGCTAAAACTATCCCCTTTGAAGCAAGTGCTCCCTTGAAGCTCCAAAGATTCTCATACAAAGAGCTAAAGCATGCCACCAATGGCTTTGACACCGCCAATGTCATTGGCAAAGGTGGCTCTGGCACCGTTTTCAGGGGAATACTTAAAGATGGGAAGCTGGTTGCAGTCAAGCGCCTAGACACGTTGTCTTTGCAGACAGAGCGAGAGTTTCAGAATGAGCTGCAGATTCTTGGTGGGTTACGATCACCTTTTTTGGTGACCCTTTCGGGCTATTCTGTGGAAAAGAACAAGAGAATGTTGGTTTATGAATATATGCCCAACAGAAGCTTGCAGGAGTCCCTCTTTGGAGATGGATGCTTGTGTTTGAGTTGGGAGAGGAGATTTTGCATAATATTGGATGTTGCTAGAGGATTGGAATTCCTGCACCTTGGATGTGATCCACCAGTGATCCATGGGGATATTAAGCCAAGCAATATTCTGCTTGATGCAGAGTATAATGGGAGGATCTCAGACTTTGGGTTATCAAGGATAAAAGTGGAGGAAATTTCAATTTCGGATATTGGTGGGGATGATTGGAATTGCAAGTTTGTGCCTTATGATGATGAGTTTTCTAGCATTGATCACAGTAAGGAGTTAACTGTTAACTCTTCTTTGGTGGATGATGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAAACAGGATGGAAATGGTGAATTATGCAGCAAAGACTATGTCATGGAGTGGATAGGGAGTCAGATTTCTCCATCAAACCCTGATTGGGATGATGGAAAGAACAATATTCATGAGAAAATAGAGTTGGAAAATTCAAGTCCATTAGATAAACCCAATGATGCAAATGGACTTCAAATGCAGGTATTTGAGATAGGAAATAATACTAATGATGGAGTTGAGAAGAAAGATCGTAAGAAGAAGCAGAGGAACATGCAAGAGTGGTGGAAAGAAGAGCACCTTGCTGAATTAAGCAAGAAGAGCAGTAATCTGAGAAATCTTCAAACTAAATGGAAGAAAGGCTTGAAAGTACCCCATTTTGATTTAGATGAGAGGTTGAAAGAAGATTACAACAAGGACCAAGCAAGCTTGTGTATTAACTTGGCACTCACTTGCTTACAGAAGATTTCAGAATTGCGCCCAGATATTGGTGATATTGTTAAGATTTTGAAGGGGGATATGGACCTTCCACCACTTCCATTTGAGTTCTCCCCTTCTCCACCTTCCAAATTATACAGCAGATCAAGGAGAAAACCAAAGGGCAATGCAGAATAG 1446 0.4246 MPSRPIPPPSPSFVTKTRVLFLALTISASVVIFCSLLYFLYHLWHSLVHRAKTIPFEASAPLKLQRFSYKELKHATNGFDTANVIGKGGSGTVFRGILKDGKLVAVKRLDTLSLQTEREFQNELQILGGLRSPFLVTLSGYSVEKNKRMLVYEYMPNRSLQESLFGDGCLCLSWERRFCIILDVARGLEFLHLGCDPPVIHGDIKPSNILLDAEYNGRISDFGLSRIKVEEISISDIGGDDWNCKFVPYDDEFSSIDHSKELTVNSSLVDDEKANGKQWGKDWWWKQDGNGELCSKDYVMEWIGSQISPSNPDWDDGKNNIHEKIELENSSPLDKPNDANGLQMQVFEIGNNTNDGVEKKDRKKKQRNMQEWWKEEHLAELSKKSSNLRNLQTKWKKGLKVPHFDLDERLKEDYNKDQASLCINLALTCLQKISELRPDIGDIVKILKGDMDLPPLPFEFSPSPPSKLYSRSRRKPKGNAE 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00124 481 SUPERFAMILY Protein kinase-like (PK-like) 58 231 IPR011009 -
Sebi60g00124 481 FunFam Receptor-like serine/threonine-protein kinase At4g25390 48 154 - -
Sebi60g00124 481 ProSiteProfiles Protein kinase domain profile. 79 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00124 481 SMART serkin_6 79 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00124 481 Pfam Protein kinase domain 81 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00124 481 Coils Coil 374 394 - -
Sebi60g00124 481 PANTHER OS07G0586332 PROTEIN 406 475 IPR044576 -
Sebi60g00124 481 MobiDBLite consensus disorder prediction 455 481 - -
Sebi60g00124 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Sebi60g00124 481 Gene3D Transferase(Phosphotransferase) domain 1 155 245 - -
Sebi60g00124 481 FunFam Os07g0541700 protein 155 236 - -
Sebi60g00124 481 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Sebi60g00124 481 Gene3D Phosphorylase Kinase; domain 1 53 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00124 Sebi-Chr60 1714828 1716948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00124 64 227 Receptor kinase-like Gene Family AT3G58690 47.337 4.15e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Sebi60g00124 Pkinase 7.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00124 - - qsu:112019432 397.897