Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00113 ATGGATTGTTCATCATGGGTTAACACATCCTTAGATCTCAACATTAATCCCCATAGAGTTCATGAAGATGTTCCCAAGAAGGAGGTTATAGAAAGCAAACTTTTCTCTTTGGGGATGACCGAGTTTTCTCTCAAAGAAGAGTCCACAAATGAGTTGGAGGAGGAACTGAAGCGCGTGACAGCAGAAAACAAGAAATTGGTGGAAATGCTGTCAGTGGTGTGTGAGAACTACAACACTTTGAGAAGCCACTTGATGGAATATATGAGCAAGAACCCTGAAAAGGAGCTCAGCCCAACATCAAAGAAAAGGAAGTCTGAAAGCAGCAATAACAATAGTAATCTGATGGGAATTAACAATGGAAACTCTGAGAGCAGCTCTACTGATGAAGAAGAATCTTGCAAGAAACCAAAGGAAGAAACCATCAAAGCCAAAATTTCAAGAGTCTATGTCAGGACTGAAACATCAGATACAGGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGGCAGAAAGTGACCAGAGATAACCCTTGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTTAAGAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTGCTGGTTGCTACATATGAAGGGGAGCACAATCATCCCCAACCATCTCAAATAGAGGCAACATCAGGTTCAGGCCGTAGTGTGAGCCTAGGTTCAGTACCTTGTTCAGCATCTCTCAGCTCTTGCTCACCACCAGCAGTTGTTACCCTGGACTTGACAAAACCTAAGTGCAACACAGAACCCAAAAAAGATTCATCTAAAGTAGTACCTCAGGTTTTGGTGGAACAGATGGCTACTTCTTTGACAACGGATCCTAATTTCAGAGCAGCACTTGTTGCAGCCATCTCAGGAAGATTGATGCACAAGAATTAA 933 0.4244 MDCSSWVNTSLDLNINPHRVHEDVPKKEVIESKLFSLGMTEFSLKEESTNELEEELKRVTAENKKLVEMLSVVCENYNTLRSHLMEYMSKNPEKELSPTSKKRKSESSNNNSNLMGINNGNSESSSTDEEESCKKPKEETIKAKISRVYVRTETSDTGLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQPSQIEATSGSGRSVSLGSVPCSASLSSCSPPAVVTLDLTKPKCNTEPKKDSSKVVPQVLVEQMATSLTTDPNFRAALVAAISGRLMHKN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00113 310 Coils Coil 42 69 - -
Sebi60g00113 310 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi60g00113 310 Gene3D WRKY domain 144 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi60g00113 310 ProSiteProfiles WRKY domain profile. 160 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi60g00113 310 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 306 IPR044810 GO:0003700
Sebi60g00113 310 MobiDBLite consensus disorder prediction 103 126 - -
Sebi60g00113 310 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi60g00113 310 MobiDBLite consensus disorder prediction 89 138 - -
Sebi60g00113 310 FunFam WRKY transcription factor 40 146 223 - -
Sebi60g00113 310 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00113 Sebi-Chr60 1630801 1632288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00113 4 310 WRKY Transcription Factor Family AT1G80840 54.206 4.78e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi60g00113 WRKY 3.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00113 - - gmx:100807966 441.425