Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00111 ATGGATCCACCACCACCAAGCAGCACCAACAACCCGAGAAGCATAATCTTCAACAAGTACGAGATGGGGCGGGTCCTGGGTCAGGGCAACTTCGCCAAGGTCTACCATGGCAGAAACCTTGCGACCAACGAGAGCGTGGCCATCAAGGTCATCAAGAAAGACAAGCTCAAAAAAGAGAGGCTTGTCAAACAGATAAAGCGCGAGGTTTCCGTGATGCGTTTGGTTCGTCACCCTCACATCGTGGAGCTCAAGGAAGTGATGGCCACAAAGGGGAAGATCTTCCTCGTCATGGAATACGTCAAAGGCGGTGAACTCTTCGCCAAAGTCGCAAAAGGAAAGCTCAAAGAACAAGTCGCTAGAAAGTACTTTCAACAACTCATCAGCGCCGTCGATTTCTGCCACAGCCGCGGCGTCACCCACCGTGATCTCAAGCCTGAGAATCTCCTCTTGGATGAAAACGAGGACCTTAAAGTCTCCGACTTTGGCCTCTCCGCCTTGCCGGAACAACGCCGTTCCGATGGGATGCTCCTCACACCGTGTGGGACCCCTGCTTATGTTGCACCAGAGGTGTTGAAGAAAAAGGGCTATGATGGTTCCAAGGCTGATATATGGTCCTGTGGTGTCATTCTCTATGCTTTGCTCTGTGGGTATCTTCCATTTCAAGGTGAGAATGTGATGAGGATTTACAGGAAGGCGTTTAAAGCTGAATATGAGTTACCTGATTGGATTTCACCACAGGCCAAGAACTTGATCTCTAATCTGCTTGTTGCTGATCCTGAAAAGAGGTATTCAATCATTGACATCATGCAGGATCCTTGGTTTCAAATTGGGTTCATGAGACCCATTGCTTTTTCGATGAAGGAAGATAACATCAACATTGATTTCAATGAGGATGGAGAAGAAGGAGAGGTTCCTGAAATGATGGGGGCAATGGCAAAGCCAGCTCGTCCTTTTTACAATGCGTTTGAGATCATTTCGTCTTTGTCACATGGTTTTGATCTTAGGAGCTTGTTTGAGACGAGGAAGCGATCCCCGTCTATGTTCATATCCAAGTTTTCGGCTTCGGCGGTGGTGGAGAAGCTTGAGGAGGTGGCGAAGAAGCTCAAGTTTAGGATAACGGGGAAGAAAGAGTTCATGGTGAGGATGCAGGGGACGAAAGAAGGGAGGAAGGGGAAGCTGGCAATGACAGTGGAGGTTTTTGAGGTGGCGCCGGAGGTGGCGGTGGTTGAGTTTTCTAAGTCTGCCGGAGACACGCTTGAGTACATTAAGTTCTGTGAGGAACAAGTGAGACCTTCCCTCAAAGACATTGTTTGGAGCTGGCAGGGTGACAGTAACTCCAATCAGTAG 1347 0.4885 MDPPPPSSTNNPRSIIFNKYEMGRVLGQGNFAKVYHGRNLATNESVAIKVIKKDKLKKERLVKQIKREVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFAKVAKGKLKEQVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVMRIYRKAFKAEYELPDWISPQAKNLISNLLVADPEKRYSIIDIMQDPWFQIGFMRPIAFSMKEDNINIDFNEDGEEGEVPEMMGAMAKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSASAVVEKLEEVAKKLKFRITGKKEFMVRMQGTKEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYIKFCEEQVRPSLKDIVWSWQGDSNSNQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00111 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Sebi60g00111 448 SUPERFAMILY Protein kinase-like (PK-like) 16 275 IPR011009 -
Sebi60g00111 448 Gene3D Kinase associated domain 1, KA1 318 439 - -
Sebi60g00111 448 FunFam Non-specific serine/threonine protein kinase 315 438 - -
Sebi60g00111 448 Pfam NAF domain 318 373 IPR004041 GO:0007165
Sebi60g00111 448 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00111 448 ProSiteProfiles NAF domain profile. 314 339 IPR018451 GO:0007165
Sebi60g00111 448 FunFam Non-specific serine/threonine protein kinase 12 99 - -
Sebi60g00111 448 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Sebi60g00111 448 CDD CIPK_C 320 434 - -
Sebi60g00111 448 Gene3D Transferase(Phosphotransferase) domain 1 11 317 - -
Sebi60g00111 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 434 - -
Sebi60g00111 448 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00111 448 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi60g00111 448 FunFam Non-specific serine/threonine protein kinase 13 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00111 Sebi-Chr60 1589812 1591158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00111 15 448 CBL-interacting serine-threonine protein kinases AT5G25110 62.989 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi60g00111 Pkinase 1.3e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00111 - - lja:Lj3g3v2118210.1 725.317