Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00110 ATGTTTCAGAGTGTTCCTAATGGAGATGCCATTTTTATGAAGTGGATACTTCACAATTGGAATGATGAAGATTGCTTGAAGTTGTTGAAGAATTGTCATAAAGCTATTCCTGATGATGGAAAAGTGATTGTCGTGGACGCAGTTCTTCCTGTTTTGCCTGAAAATACAACTATTGCAAAGGTTGCTTCCCAAGCTGACCTCATAATGATGACTCAATTCTCTGGAGGAAAAGAGCGAACCCAAAATGAATTCATGAAATTAGCATTGGGATCTGGATTTAGTGGCATTAGAGTCGCCTGTCGTGTCTCTGTCTTCTGCGTGTTGGAGTTCTTTAAGTAG 339 0.3982 MFQSVPNGDAIFMKWILHNWNDEDCLKLLKNCHKAIPDDGKVIVVDAVLPVLPENTTIAKVASQADLIMMTQFSGGKERTQNEFMKLALGSGFSGIRVACRVSVFCVLEFFK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00110 112 Gene3D Vaccinia Virus protein VP39 2 102 IPR029063 -
Sebi60g00110 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 112 IPR016461 GO:0008168
Sebi60g00110 112 PANTHER O-METHYLTRANSFERASE 1 97 IPR016461 GO:0008168
Sebi60g00110 112 Pfam O-methyltransferase domain 1 94 IPR001077 GO:0008171
Sebi60g00110 112 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 105 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00110 Sebi-Chr60 1578065 1579012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00110 1 112 Monolignol Biosynthesis Gene Families AT5G54160 50.000 2.00e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00110 K13066 - gmx:100789402 182.57