Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00086 ATGGAGGAATCATGGGAGAATTGGCATCTTCATACGGAAATGGATTGTGATGATGATATTTTCATAGACAAGTGCTACACTGATGATGACGAATTCCTTAGAGAGATCCTCTTGCAGCCATCGGATTTCTCTTCTGAAAGTGAAAGTGATCATCATCTCGTTCATGCTTCCTCCACCGTCCAAAACAATACCTCCACCGCCGCAGAGGGCGGTGTTTTATCATCGGAAGGGATGGAGGAGAAGAAGAGAAAAAGGAGACAGGAACTCACAGAAAGGTTCATAGCACTTTCAGCCACCATTCCTGGCTTGAGCAAGACGGACAAAGCATCTGTGCTTCGAGCAGCAATCGATTACGTGAAAAAACTTCAAGAACGTGTGCAGGAGCTTGAAAAACATGACAAAAAAAGGGCTAGTGTGGAGACAGTGATAGTGATCAAGAAACCCGATGTGAGTGGAAATGAATTATTAGACCCCACCTCGAGTGAAACGAGTTGTGATGATTGCAGCATCCTCCCTGAGATTGAAGCAAGAATGTTGGGGAATGAGGTGCTTATTGAGATCCACTGTGAGAAACAAAATGGCATTGAACTCAAAATAATGGACCACCTTGAAAATCTCCACCTCTCTGTCACCGGTAGCAGCGTCTTGCCTTTTGGGAATTCCGCTCTTTCCCTTACTATTATAGCTCAGGTGGGTGAAGGGTACAAAATGACAGTGAATGATTTGGTTAGAAGTCTTAGACAATTGCTCTTGAAGATGGCCAGTAAATGTGATCCGTACTAG 783 0.4419 MEESWENWHLHTEMDCDDDIFIDKCYTDDDEFLREILLQPSDFSSESESDHHLVHASSTVQNNTSTAAEGGVLSSEGMEEKKRKRRQELTERFIALSATIPGLSKTDKASVLRAAIDYVKKLQERVQELEKHDKKRASVETVIVIKKPDVSGNELLDPTSSETSCDDCSILPEIEARMLGNEVLIEIHCEKQNGIELKIMDHLENLHLSVTGSSVLPFGNSALSLTIIAQVGEGYKMTVNDLVRSLRQLLLKMASKCDPY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00086 260 Gene3D - 79 143 IPR036638 GO:0046983
Sebi60g00086 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 122 IPR011598 GO:0046983
Sebi60g00086 260 MobiDBLite consensus disorder prediction 47 84 - -
Sebi60g00086 260 MobiDBLite consensus disorder prediction 54 71 - -
Sebi60g00086 260 Pfam Helix-loop-helix DNA-binding domain 83 123 IPR011598 GO:0046983
Sebi60g00086 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 131 IPR036638 GO:0046983
Sebi60g00086 260 PANTHER BHLH TRANSCRIPTION FACTOR 74 252 - -
Sebi60g00086 260 Coils Coil 112 132 - -
Sebi60g00086 260 SMART finulus 79 128 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00086 Sebi-Chr60 1147283 1149121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00086 83 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 48.555 3.48e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi60g00086 HLH 6.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00086 - - aprc:113857138 263.848