Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi60g00082 ATGTGGACTAATTATAGCTTTCATATGAAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGTTGTCCAAGAGAAAGAAGGGGGCTTAGACTCCTCAGTTGTGGAAGATGGAGCAAACTGGAGCATGGGACAGCGACAGTTATTCTGTTTGGAGCGTGCTCTTCTAAGGAGAAGTCGGATATTGGTGCTGGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTACAGAAGACCATTAGGACTGAGTTTGCAGATTGTACAATAATCACAGTTTCTCACAGGATACCGACTGTGATGGATTGCACTAAGGTCCTTGCCATTAGTGATGGTCTTCAGCAAGGAAAACATGGATAA 360 0.4306 MWTNYSFHMKVLGKCQLQEVVQEKEGGLDSSVVEDGANWSMGQRQLFCLERALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTIITVSHRIPTVMDCTKVLAISDGLQQGKHG 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi60g00082 119 Pfam ABC transporter 28 67 IPR003439 GO:0005524
Sebi60g00082 119 Gene3D - 5 118 IPR027417 -
Sebi60g00082 119 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 20 112 - -
Sebi60g00082 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 113 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi60g00082 Sebi-Chr60 1112610 1113837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi60g00082 27 118 Calmodulin-binding Proteins AT2G36910 34.043 5.38e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi60g00082 K05666 - lja:Lj5g3v1961200.1 196.438