LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi60g00072	ATGGGTGAGGCTCTGCTTTCGGAGCTTGCGACGGAGATAGTGGTCCCGGTGTGCGCTGTCATCGGGATCGTCTTCTCGTTGGTTCAGTGGCTCCTGGTTTCGCGCGTCAAGCTCACGCCGGAGCGGCACGGAACATCGTCGTCCCCGCGCAACAACAAGAACGGTTATGGTGACTACCTGATTGAGGAAGAAGAAGGTATCAACGACCACAGCGTCGTCGTCAAATGCGCTGATATACAGAGCGCCATCTCCGAAGGGGCAACGTCCTTTCTTTTCACTGAATATCAATATGTGGGGATCTTCATGGTTGCTTTTGCAATCTTGATCTTCCTTTTCCTGGGCTCTGTGGAAAGCTTCAGTACTAAGAGCCAGCCCTGCACATATGATAAGAGCAAGCTTTGCAAGCCAGCCCTTGCAACTGCATTGTTTAGCACTGTGTCTTTCTTGCTTGGTGCTATAACCTCAGTCCTGTCTGGTTTTCTTGGGATGAAAATTGCGACCTATGCCAATGCAAGGACAACCTTGGAAGCGAGAAAGGGAGTTGGAAAGGCTTTTATTACTGCATTTAGGTCTGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATTGCCATCAATCTCTTCAAGCTTTATTATGGTGATGATTGGGAGGGTCTTTTCGAGGCTATAACGGGTTATGGTTTGGGTGGATCTTCCATGGCCCTGTTTGGAAGAGTTGGTGGTGGTATATATACCAAGGCTGCTGATGTAGGTGCTGATCTAGTTGGGAAAGTTGAAAGAAACATCCCTGAGGACGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGTTCTGATCTTTTTGGCTCATATGCTGAGTCATCCTGTGCTGCCCTGGTTGTTGCTTCCATTTCCTCATTTGGAATCAACCACGAGTTCACTGCTATGTTATATCCCCTACTTATCAGTTCTATGGGCATTCTTGTCTGTTTGATTACTACTCTTTTTGCAACTGATTTCTTTGAAATCAAGGTTGTCAAGGAAATTGAACCCGCATTGAAAAAGCAGCTTATCATCTCTACAGTACTCATGACTGTTGGAATTGCAATTATTACTTGGCTTGCTTTGCCATCATCATTCACAATTTTCAACTTTGGGGCTCAAAAGGAAGTAAAGAGCTGGCAGCTGTTCCTCTGTGTGGGTGTTGGTCTTTGGGCTGGACTTATTATTGGGTTTGTTACTGAATATTATACAAGCAATGCTTACAGCCCTGTACAAGATGTTGCTGATTCCTGCCGGACTGGAGCTGCAACTAATGTCATCTTCGGCCTTGCTCTGGGATACAAGTCCGTCATTATTCCCATTTTTGCCATTGCAATCAGCATTTTTGTGAGTTTTACTTTTGCTGCAATGTATGGTATCGCTGTGGCTGCCCTTGGGATGCTGAGCACCATTGCAACTGGATTGGCTATTGATGCCTATGGGCCTATCAGTGACAATGCGGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGGATCCGTGAGAGAACTGATGCCCTTGATGCTGCTGGAAACACTACTGCTGCCATTGGCAAGGGATTTGCAATTGGGTCTGCTGCACTAGTATCTTTGGCCCTGTTTGGTGCTTTTGTCAGCAGAGCAGGAATTTCAACTGTTGATGTCTTGACTCCCAAGGTCTTTATTGGACTCTTAGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGTAGGCAGTTCAACACCATTCCAGGACTCATGGAGGGTACTGCCAAGCCTGATTATGCTACCTGCGTCAAGATTTCTACTGATGCATCCATCAAGGAGATGATTCCCCCAGGCGCCCTTGTCATGCTCACACCACTCATTGTTGGTATCTTATTTGGTGTGGAAACACTTTCAGGTGTTCTTGCAGGCTCTCTAGTTTCTGGTGTGCAGATCGCAATATCAGCATCCAACACTGGTGGTGCCTGGGACAATGCTAAGAAGTACATTGAGGCTGGTGCGTCTGAGCATGCTAGGACTTTGGGCCCAAAGGGATCTGACCCACACAAGGCAGCTGTTATTGGCGATACCATTGGAGACCCTCTTAAGGATACTTCAGGACCTTCACTCAACATCCTTATTAAGCTCATGGCGGTTGAGTCACTAGTCTTTGCTCCATTTTTCGCCACCCATGGCGAAATTTCTTTGGCAAATCATAGAGTTGTCATTCACATTGCGGTTAAGAAGCTTCTTTGGCATCTTCCTGAAGTCCTGATGACGTTCTCTCACCGTGGATTCACCTGGGTGGGAAGAGAAGGAAATAAAGCGGCTCACTTTATCGCTCAGTTAAGGGAAGAATCGGCTCTACCATCAAACTGGGTTGTTCAGCCTCCTCCTGGCCTTCGATCCATTTTGACACAAGACTCCATAGCTGGTTGTGCATCGAGATCGGCTTCTTCTTCTTACTCCCTTAGACAAACGGTGATATCAGAGGTTGTTCCTCCTTGA	2595	0.4701	MGEALLSELATEIVVPVCAVIGIVFSLVQWLLVSRVKLTPERHGTSSSPRNNKNGYGDYLIEEEEGINDHSVVVKCADIQSAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVESFSTKSQPCTYDKSKLCKPALATALFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTAMLYPLLISSMGILVCLITTLFATDFFEIKVVKEIEPALKKQLIISTVLMTVGIAIITWLALPSSFTIFNFGAQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGEISLANHRVVIHIAVKKLLWHLPEVLMTFSHRGFTWVGREGNKAAHFIAQLREESALPSNWVVQPPPGLRSILTQDSIAGCASRSASSSYSLRQTVISEVVPP	864

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi60g00072	864	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	758	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Sebi60g00072	864	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	758	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Sebi60g00072	864	Pfam	Inorganic H+ pyrophosphatase	45	753	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Sebi60g00072	864	NCBIfam	V-type H(+)-translocating pyrophosphatase	10	762	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Sebi60g00072	864	PIRSF	H+-PPtase	8	766	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi60g00072	Sebi-Chr60	952600	958882	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi60g00072	4	631	Primary Pumps ATPases	AT1G15690	89.189	0.0	1137

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi60g00072	K23025		-	gmx:100803691	1425.61