Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi609g00013 ATGATGCTTCACCCATACCCACTAAACCTTTCACACTCCCTTCACCCATTCTTAACCTTTCCTCCTCAACTCCAACCTCAACCCTTGTTCTCCACCATCAAATCACAACCATCAAACAAGGCATGTTTCCAACCCTACATTCGTGCATTCTTCAAGTGCCACTGCAGCAGTTCCTTCGCCAATCTTGACACTGAATTCGCGAAGCTCGTTTCTTTTTTTCAAGAATTAGGGATTGGTTTTGAGGAAACAAAAGTGCTCTTTCTCAATAACCCTGACCTTAGTTTAGTTTCAGTAGATTCATTGCATGCTAGGGTCCTTTCTTTACAGTCTTTGGGGTTGGATAGGGTTGCCATGTATCAATTGGTTACAAAGCGCCCAACTGTGCTAACAGATAAGAAAATTGTTCCCTTGTTAAGCTTTTTGAGAAATGAACTAGAAGGACAGCTTGAGCAAGCACAGATAGAGCGTCTTTTATCTCTTGAACCAAAATTCTTGGTGGATTTTCCTCAGAAGGTTAAACTGCTTGTTGAAAGAGGTGTTCCTGCTGATAAGATTGTCCATGTGCTCAACAAAGTTCATTTACAGAAGGCACTGTGTGGCAAGTCCATGGATGAAATTGACAGATTTATAACTTTCTTGGAACCCTTTGGTAGCATTAGTTTGATCCTGAGGCTCCCTACAATTCTCAAATTTGATTTAGATAAGCAGCTCATTCCAAGAATCAAAGTACTGGTGGAACTTAGTAATGGAGATAAGTTTGGTGTTGCCAAAGTGCTCCTTAGATACCCTGCAATCTTGAACTATACTGTGAAACATGTGGAGGGACATTTACAGTTCTTGAGGTCTTTTGCAAATCTTGATGACAAACAAATATTTAGAATAATGTCAATATTTCCAGCTGTTGTCACTATTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCATGGAATGTGGGTTAGATTCAGATGATATTTTCAAGTTCTTGATTAAAGCACCCTTATTTCTAGGTCATTCATTCCATGACAACATTGTCTATAAGCTTGTGTTTCTTGTCAAAATTGGATATAAATATAAGACAAAAGACTTGGCAATGGCAATTGGTATTTCTACTAGGACAAGCTGTGAGAACATGCAAAAGGTGATAAGTCTATTCTTGAATTATGGGTTTTCATGTGAAGACATTATTGCTATGAGTAAGAAGCAGCCACAGATACTGCAGTATAATCATACTTCTTTAGAGACCAAGATGAACTACTTGATAGAGGACATGGATCGGGACATTAAGGAGTTATTGGTTTTTCCTGCATTTCTTGGCTACAAGTTGGATGACAGAATTAAGCCTAGATATGAGATAAGGAAGAGTACAAAGGGGGGACAAATGTCTCTCAATAAGCTTCTAACTGTTTCAAGTGAGATGTTTACTGACAAGAGAAAAAAGGCCTCTGCTCTAGCATCTGAATTGTGA 1473 0.3883 MMLHPYPLNLSHSLHPFLTFPPQLQPQPLFSTIKSQPSNKACFQPYIRAFFKCHCSSSFANLDTEFAKLVSFFQELGIGFEETKVLFLNNPDLSLVSVDSLHARVLSLQSLGLDRVAMYQLVTKRPTVLTDKKIVPLLSFLRNELEGQLEQAQIERLLSLEPKFLVDFPQKVKLLVERGVPADKIVHVLNKVHLQKALCGKSMDEIDRFITFLEPFGSISLILRLPTILKFDLDKQLIPRIKVLVELSNGDKFGVAKVLLRYPAILNYTVKHVEGHLQFLRSFANLDDKQIFRIMSIFPAVVTISRERKLRPRIQFLMECGLDSDDIFKFLIKAPLFLGHSFHDNIVYKLVFLVKIGYKYKTKDLAMAIGISTRTSCENMQKVISLFLNYGFSCEDIIAMSKKQPQILQYNHTSLETKMNYLIEDMDRDIKELLVFPAFLGYKLDDRIKPRYEIRKSTKGGQMSLNKLLTVSSEMFTDKRKKASALASEL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi609g00013 490 FunFam - 49 248 - -
Sebi609g00013 490 Pfam mTERF 71 355 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 Pfam mTERF 375 476 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 119 148 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 48 79 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 328 359 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 398 429 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 256 287 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 430 462 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Sebi609g00013 490 Gene3D Transcription termination factor 3, mitochondrial 47 254 IPR038538 -
Sebi609g00013 490 Gene3D Transcription termination factor 3, mitochondrial 255 486 IPR038538 -
Sebi609g00013 490 PANTHER CGI-12 PROTEIN-RELATED 58 202 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi609g00013 Sebi-Chr609 446241 447797 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi609g00013 mTERF 1.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi609g00013 - - gmx:100799904 590.497