Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi608g00014 ATGTTCTCACAACAAGAGGAGGATCTTATAATGAGTCTTCATGAAGTTCTTGGAAATAGGTGGGCTCAAATTGCAGCACAGTTGCCAGGGAGAACAGATAATGAGATAAAGAACTTCTGGAATTCATGTTTGAAGAAGAAGCTAATGAAGCAAGGGATTGACCCAACTACACACAAGCCTCTCCTCAATAGTGAAACTCATGTAAAGGAAGAGAAGAAGGAAATAATAAGCACAGAGACAGAGACACCTTCCATGCTAATACCAATTTCTGAAGCAGGGGTTTAG 285 0.4035 MFSQQEEDLIMSLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPTTHKPLLNSETHVKEEKKEIISTETETPSMLIPISEAGV 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi608g00014 94 MobiDBLite consensus disorder prediction 63 78 - -
Sebi608g00014 94 MobiDBLite consensus disorder prediction 54 94 - -
Sebi608g00014 94 CDD SANT 2 41 IPR001005 -
Sebi608g00014 94 ProSiteProfiles Myb-like domain profile. 1 44 IPR001005 -
Sebi608g00014 94 PANTHER MYB DOMAIN PROTEIN 55 1 74 - -
Sebi608g00014 94 Pfam Myb-like DNA-binding domain 2 43 IPR001005 -
Sebi608g00014 94 SUPERFAMILY Homeodomain-like 2 61 IPR009057 -
Sebi608g00014 94 SMART sant 2 46 IPR001005 -
Sebi608g00014 94 Gene3D - 1 79 - -
Sebi608g00014 94 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 48 IPR017930 -
Sebi608g00014 94 FunFam Transcription factor MYB86 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi608g00014 Sebi-Chr608 323201 323585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi608g00014 2 65 MYB Transcription Factor Family AT5G26660 76.562 2.40e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi608g00014 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi608g00014 K09422 - gmx:100801702 141.354