Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi608g00011 ATGGAAACCAAACCCGGCCAAACCATCAAGCTCCTCTGTAGCTACGGCGGCAAGATCCTTCCTCGCGCCACCGATGGTGAGCTCCGTTACGTTGGCGGCCACACCAGAGTACTCGCCGTCGATCGTTCCATATCCTTTTCTGAATTGATGGTGAAACTGGGAGAGTTGTGCGGTTCGTCTGTGATCTTGAGGTGTCAATTGCCCAAGGGAGACTTGGAGACCTTGATCTCCATCACCAGCGATGAAGATTTGGCAAACATAATCGAGGAATATGATCGTGCCTCGTCCAAGTTAACTCATCCGTTGAAGATCAAAGCCATTCTTTCGCCGCCAAAATCAATCAAGAAGGTTTCTCCTGTTCCGTCGTCTTCGTCCAGTGCCAGTCACTCTCCGTCCAGATCGCCTCATACCTCATCCGAATCGCTGCCGTACGCGGCGGTTCATCGCATCAGCCGCTTCAATCGCTCGCCGCGGGCGCCGGTAGGGTATCCGATCGGCATCCGTAATGGATCGGCGAAAGCTGGTTGCTACCAGGGCCGGTTCGAGGGAAGCCCAAGCCTGAATTTCTTGTTGGACATGGTGGCTGCTTTGGGACTCTCTTTTTTAGCAGTTAGGGTCAAGAAAAGGGGATGGAGACATGGTGCCGTAAGGCGTGGGAGACTTGGGGAAAAGGACAAAACCTTTGAGCCTTCTTGGGATTGGGAGGCCCCAGCTAGAGATTTGGTCATGGTTCTCAATGCACATGTGAAGAATCTCGAAGAACAGGCACATGGTGCTGCCCAATAG 786 0.5305 METKPGQTIKLLCSYGGKILPRATDGELRYVGGHTRVLAVDRSISFSELMVKLGELCGSSVILRCQLPKGDLETLISITSDEDLANIIEEYDRASSKLTHPLKIKAILSPPKSIKKVSPVPSSSSSASHSPSRSPHTSSESLPYAAVHRISRFNRSPRAPVGYPIGIRNGSAKAGCYQGRFEGSPSLNFLLDMVAALGLSFLAVRVKKRGWRHGAVRRGRLGEKDKTFEPSWDWEAPARDLVMVLNAHVKNLEEQAHGAAQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi608g00011 261 SUPERFAMILY CAD & PB1 domains 25 114 - -
Sebi608g00011 261 MobiDBLite consensus disorder prediction 116 141 - -
Sebi608g00011 261 PANTHER OS05G0427100 PROTEIN-RELATED 7 156 - -
Sebi608g00011 261 MobiDBLite consensus disorder prediction 113 141 - -
Sebi608g00011 261 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Sebi608g00011 261 SMART PB1_new 23 111 IPR000270 GO:0005515
Sebi608g00011 261 CDD PB1_UP2 12 97 - -
Sebi608g00011 261 Gene3D - 29 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi608g00011 Sebi-Chr608 179919 183181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi608g00011 9 96 MAP Kinase Kinase Kinase AT5G57610 48.864 3.92e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi608g00011 - - lja:Lj0g3v0315899.1 232.261