Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi607g00018 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTACTTCCAACAGCAACCTTCAACTTCTTCGTCTTCATCCTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATATTATTTATTGGTAAAATCTATCCAAGAACTCCGAGAGAAAAAGGAAGGCCTTGTTACAGTTGGCATTGGTGGTCCAAGTGGTTCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCGATGGAGAATTATTGTGATGGGGTTGGCGAAATGAATGATCTGGATTCTATTGATTTTGATACCCTGATCAAGAATCTTGAGGATTTGACAAAAGGTGATGATACATTAATTCCAGAGTTTGACTACCAGCAAAAGAGGCGTGTTTGCTATAAAACAATAAAGAGTGCTTCATCTGGGGTGGTAATTGTTGATGGTACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCCTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCCGGATAAACAACAGCTTTGTCTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTTCAGATGGACATTCAGATTCTTCCTCTCAAGGAAATGAAGCCCAAACAGATAATTTTATTGAAATGTACCTTAGACCGCCTTCGGCTAGCGAAGAAGCAAGGATAAATGATTGGATCAAAGTGAGGCAGTCTGGAATTAGGTATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGGCCCAAAGCTGAGTTTGAGGTTGGGCGAATGACATTGGGTGGATTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGTGCATCCACAACTGTCAATAATGGCAAGGTTTCAATATCTCTTGAAACCATTGATGCTCTTGGTGAGACATTCATGGTGATGAGAGGAACTGATAGGAAGACTGTTGGAACAGAAGCTTTGAGGATGGGTATCAGTGGACCTTGGCTTACTAAATCATATCTGGAAATGATTCTCGAGAGAAAAGGTGTTCCCCGTCTTAGTACACCACCCCTTGTGTCTAATACAACTGTGGCTGGTAATCTAGAAACAGCAATTGTTGCACCAAAGCCAATTCGTGTTACTCCTAACCTTGTTACTGGGCTTGAGGATTTATCTCAACCATGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTACATGGCATTTCATATCTCCAGATTCCTCTCAACCTGATAACTCAGCCCTAGATCCTTCATCTTTCAGGGACACCATTAGGCTTGCTCCAATGCCTGATTCATGTGACTTGGATAGGGGATTGCTTTTGGCAGTTCAAGCGATACAAGCTTTGCTGGAGAATAAAGGTGTTCCAGTTATAGTTGGAATTGGTAATATGGACATTTCCTGA 1587 0.4115 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYCDGVGEMNDLDSIDFDTLIKNLEDLTKGDDTLIPEFDYQQKRRVCYKTIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESSDGHSDSSSQGNEAQTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVNNGKVSISLETIDALGETFMVMRGTDRKTVGTEALRMGISGPWLTKSYLEMILERKGVPRLSTPPLVSNTTVAGNLETAIVAPKPIRVTPNLVTGLEDLSQPWTRSPTKSKMEPVVATWHFISPDSSQPDNSALDPSSFRDTIRLAPMPDSCDLDRGLLLAVQAIQALLENKGVPVIVGIGNMDIS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi607g00018 528 Gene3D - 63 243 IPR027417 -
Sebi607g00018 528 CDD UMPK_like 64 226 - -
Sebi607g00018 528 PANTHER URIDINE KINASE 10 274 - -
Sebi607g00018 528 Pfam Phosphoribulokinase / Uridine kinase family 105 223 IPR006083 GO:0005524|GO:0016301
Sebi607g00018 528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi607g00018 Sebi-Chr607 393827 406914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi607g00018 53 223 PRT Gene Family AT1G55810 21.466 1.57e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi607g00018 - - gmx:100778905 922.924