Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi607g00017 ATGGAGATGGAGTCAACAACCCACAACTACAAGCTCCTCTTCATCATGAACCTCGTTTTCTTCTGCTTCTGCTTCATTCAAAGCTCTCTCTTAGTATCAGCTTCTTCACCATCTGCTTCAAGATCAACCCATACATTCCCCAAAGAAGCCCTCCCCACCAAATCTGGTTACCTCCCAGTGAGCCCCACATCCTCTTCCTCCATTTTCTACACTTTCTATGAAGCACAAAATTCCACTTCACCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTTCGAGCTTGGACCCTGGCGTGTCACCAATTCCCTTACCCTTCAACCCAACCCTGCTGCTTGGAATCGAATCTTTGGCCTTCTTTTTCTTGATAATCCCATTGGAACTGGATTCAGCATAGCCTCAACACCAGAAGAAATCCCAACCGATCAAAACACCGTTGCCAAACACCTTTTTGCTGCTATAACAAGTTTTCTTCAACTTGACCCTGTTTTCGAGCATCGCCCAATTTATATTACTGGGGAAAGCTACGCTGGCAAGTATGTTCCTGCAATTGGGTATTACATATTGGAGAAAAATGCTGAGTTAAAGGTATCTGAGAGAGTGAATTTGGCTGGTGTGGCAATTGGGGATGGGTTAACAGACCCTGTAACTCAAGTGGTTACTCATGCTGCCAATGCTTACTATGTTGGATTAATCAATGAGAGGCAAAAGAACGAGTTGGAGAAAGCTCAATTAGAAGCTGTTAGGTTGATCCAAATAGGGAATTGGAGTGAAGCAACGGATGCGAGAAGAAAAGTCTTGGGAGTGTTGCGCAACATGACAGGGTTGGCTACTTTGTTTGACTATACAAGGAAAGCTCCTTATGAAGAGAATTTGGTTTCTCAGTTCTTGAACTCTGTTGAGGTGAAGAAAGCCTTTGGTGTGAATGAATCGTTTGTGTATGAGAGATGCAGTGATATTGTTAACGCTGCATTACATAATGATGTGATGAAAAGTGTGAAATATATGGTGGAACACTTGGTGAGGAGGAGCAGGGTGTTGTTATATCAAGGTCAGTATGATTTGAGCGATGGTGTGGTCCAAGTAGAAGCTTGGGTGAAGACAATGAAATGGGAAGGAACTGTGGAGTTTCTGAATGCTGAGAGGAAGATTTGGAAGGTAAATGGAGAGCTCGCTGGGTATGTGCAAAATTGGAAGTCTCTTACTAATGTTGTGGTTTTGGGGGCTGGGCATCTTTTGCCTCATGATCAGCCTGTGAATTCTCAAGCAATGATGGAAGACTGGGTTTTGGAAAGGGGTTTATTTAAAACTTGA 1350 0.4407 MEMESTTHNYKLLFIMNLVFFCFCFIQSSLLVSASSPSASRSTHTFPKEALPTKSGYLPVSPTSSSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTNSLTLQPNPAAWNRIFGLLFLDNPIGTGFSIASTPEEIPTDQNTVAKHLFAAITSFLQLDPVFEHRPIYITGESYAGKYVPAIGYYILEKNAELKVSERVNLAGVAIGDGLTDPVTQVVTHAANAYYVGLINERQKNELEKAQLEAVRLIQIGNWSEATDARRKVLGVLRNMTGLATLFDYTRKAPYEENLVSQFLNSVEVKKAFGVNESFVYERCSDIVNAALHNDVMKSVKYMVEHLVRRSRVLLYQGQYDLSDGVVQVEAWVKTMKWEGTVEFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPHDQPVNSQAMMEDWVLERGLFKT 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi607g00017 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 413 426 IPR001563 GO:0004185|GO:0006508
Sebi607g00017 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Sebi607g00017 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Sebi607g00017 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Sebi607g00017 449 SUPERFAMILY alpha/beta-Hydrolases 52 441 IPR029058 -
Sebi607g00017 449 Pfam Serine carboxypeptidase 51 441 IPR001563 GO:0004185|GO:0006508
Sebi607g00017 449 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Sebi607g00017 449 Gene3D alpha/beta hydrolase 31 446 IPR029058 -
Sebi607g00017 449 FunFam Carboxypeptidase 37 448 - -
Sebi607g00017 449 Coils Coil 245 265 - -
Sebi607g00017 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 54 430 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi607g00017 Sebi-Chr607 312406 313755 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi607g00017 304 441 Calmodulin-binding Proteins AT2G22960 21.277 8.38e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi607g00017 K09645 - gmx:102663282 724.546