Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00056 ATGAATGGTGTGACAGAGCTTGAACCAGATTACTCTGAGTTTGTTGAAGTTGATCCATCTGGAAGATATGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAAAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAAGTCAAACTTAATGATTTCCTGCAAAGTCCTGAAGATCTCGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACATTGAAGCACAGAAACATAATGAAATTCTACACTTCTTGGGTTGATACTGCAAATAGGAACATCAATTTTGTGACTGAAATGTTCACTTCTGGTACTCTTAGACAGTATAGGCTAAAGCATAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCCTGAGAGGACTTCTCTATCTTCATAGCCATGACCCACCTGTGATCCATAGAGATCTCAAGTGTGATAATATTTTTATCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGCTTGGCAGCTATTCTCCGAAAATCCCATGCTGCTCATTGTGTAGGAACACCTGAATTCATGGCACCAGAAGTATATGAAGAGGCATATAATGAATTAGTCGACATATATTCCTTTGGTATGTGTGTATTAGAAATGGTCACATTTGAGTATCCTTATAGTGAGTGCAACCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCTGAAGTGCGAGAATTTGTTGAAAAATGCCTGGCAACAGTGTCTCTAAGGCTCTCTGCAAGGGAGCTTCTAGATGATCCTTTTCTTAGAATTGATGATTATGAATATGATTTAGGACCAGTAGATGATGGAGCATTTGATGACTTGGGTCCTCTGTTTGGTCAGCCATTCTTTGATCTCCATCGGAGCTATAGTAACTTAAGCACTGAATACTCAAATGGCTTTGGATATGAAGGAGACTGGTATTGTCATCCAGCTGAGATCGAACCTAATGGAATTGAACTTTTCGAGTGCCATGATGATGAACCCTCCAAAGATGTTGACATAAGCATCAAAGGCAAAAGAAAAGATGATGGCAGCATCTTTTTGAGACTAAGAATTGCAGACAAAGAAGGTCATATTCGAAACATTTATTTCCCATTTGACATAGAGATGGATACAGCATTAAGTGTGGCAACTGAAATGGTTGCAGAACTTGACATTACTGATCAAGATGTTACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCATTGGTACCTGAATGGAAGCCAGGGCCAGGATTTGAGGAAACTACCCATTTTGCAAATCAAAGTATCTGTCACAACTGTGTGTCTAATCATACATCTGGTGGCACTGTTTTGGACTTTCTTTCACATAATCAAGATGGAAATAACTTGCAGCTTCTTCAATGCTGTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAGGAGTATGACAACCATGTTAGAGAGGATGCACAACCTAAAGTATCAGGCCAACCAGATTTCTTGCATTACCAGGAGTCATGGAATCATCATGAAAGTCGCGAACTGAGTCCAGTAGAGTCTGCTCAAAGCAATTCTGATGAACAATATGAACATTTAGATAAATCAGTATCATCAGAAGATAAAGCACAGGATGCTTGGCAGAACAAGTTTACACCCAATTCAGGAAACTCTTTTAGAAATTTATCAAGATCTCATTCTTTCTCTACTATCCATATGTTATATTGTGGCCATGAGAATGAATGTGAGAAAGAGATCCAACAAGAGGTGAGATGGCTCAGAGCAAAATACCAAATGGAGTTAAGGGAACTTAGGGATGAACAATTTGGCCTAGCAGATTCATCTTCAAATACTAGTGAGTGTAACAGAAGGCACAAAACAGAACATGGCATTAAGCCACCTCCTCTGATAGAAACAATAAATGGGGTAGACCATGGGATTCATTTGAAACCCTTTGGTAATTACTTGAATTATGATTCCAGTTGTCATTCTCAAGTCCAAAAGAGCCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCTCATGAAGAAGGTATGGGTAGTGCAAAGAGATTTTACACACGGTCATTGCTTCCAGATACTCTACACAGGACAATTTCACTCCCTATTGATGCTGTGGATGTATAA 2235 0.3969 MNGVTELEPDYSEFVEVDPSGRYGRYNEILGKGASKTVYKAFDEYQGIEVAWNQVKLNDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCVLEMVTFEYPYSECNHPAQIYKKVISGKKPDALYKVKDPEVREFVEKCLATVSLRLSARELLDDPFLRIDDYEYDLGPVDDGAFDDLGPLFGQPFFDLHRSYSNLSTEYSNGFGYEGDWYCHPAEIEPNGIELFECHDDEPSKDVDISIKGKRKDDGSIFLRLRIADKEGHIRNIYFPFDIEMDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWKPGPGFEETTHFANQSICHNCVSNHTSGGTVLDFLSHNQDGNNLQLLQCCRHGCASMHGRFEEITFQSEEYDNHVREDAQPKVSGQPDFLHYQESWNHHESRELSPVESAQSNSDEQYEHLDKSVSSEDKAQDAWQNKFTPNSGNSFRNLSRSHSFSTIHMLYCGHENECEKEIQQEVRWLRAKYQMELRELRDEQFGLADSSSNTSECNRRHKTEHGIKPPPLIETINGVDHGIHLKPFGNYLNYDSSCHSQVQKSHPNLDTQRAQNCEVMCSHEEGMGSAKRFYTRSLLPDTLHRTISLPIDAVDV 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00056 744 MobiDBLite consensus disorder prediction 636 657 - -
Sebi606g00056 744 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Sebi606g00056 744 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 648 - -
Sebi606g00056 744 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi606g00056 744 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Sebi606g00056 744 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Sebi606g00056 744 MobiDBLite consensus disorder prediction 536 583 - -
Sebi606g00056 744 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Sebi606g00056 744 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi606g00056 744 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi606g00056 744 CDD STKc_WNK 22 281 - -
Sebi606g00056 744 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Sebi606g00056 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sebi606g00056 744 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Sebi606g00056 744 SUPERFAMILY Protein kinase-like (PK-like) 27 572 IPR011009 -
Sebi606g00056 744 Gene3D - 371 454 - -
Sebi606g00056 744 MobiDBLite consensus disorder prediction 551 565 - -
Sebi606g00056 744 MobiDBLite consensus disorder prediction 566 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00056 Sebi-Chr606 516376 519508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00056 127 633 MAP Kinase Kinase Kinase AT3G04910 59.598 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi606g00056 Pkinase 8.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00056 K08867 - gmx:100775959 1223.76