Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00050 ATGGGGAAGGCAGGCAAATGGATTAGAAACTTACTTCTAGGGAAAAAAGAAGAGAAATTCAAGAAGATTGATGCATTCTGCCCCGAAAATAAGACTGCTACCAAAGTGAAGCGCAGATGGAGCTTTGGAAAACTAGCAGGTGGAAGAATAACAGGCAAGGTAGCAGAAAATCATAAATTTTCCAGATCTTTTGACTCAGGTGACTCTGCAAAATTGCAAATACAAGTCTTGTTGGAAACTAAGAATCCAAGGTATCTTCCAACATCACTTGCAAAGGTTTATGAAGACACTGAATTTGAAACAGCAGCTGCTACAAGGATTCAAGCTGCGTTTCGCTCATATTTGGCAAGGAAAGCATTACATGCTTTAAGGGGATTAGTCAAGATACAGGCACTGGTCAGGGGCCATCTTGTAAGGAAACAAACAACTGCCACACTGCGTGGCATGCATGCGTTGATGGCTATACAAGTTAGAGCCCGAATTCAGAGAATTCAGATGGTAGAGGAAGCAAATCTCCTCGGAAAACAGGCTCCCCAACATAAAGAAATTCCACACATGAAAGGTCTCATATCAGAAGAAAATCAAGATTCTGAGGATATGAGTCTGAAAGACATTTTGGGGGTTTTGAAAAGTAGAAGTGGCCCTCTAGATGGTTCGCATGTTAAGAGCAGAAAGTATGATTCCATGGCTTTCTATTCGAAGCATCTGTCAAGTTCGAAACGAGAAAATCAACACAAGCAGAACACTTTAGTCACAGCACCAAACAGCCCAGCACACTACAGGGACATGTCTGAATTTAACCCAACAACAATGGCGTTATCAACTTCTCAGCGCCACCTAGTGCCTCACCGCCAATCATGGTCACCAAATTACATGAATAAGACTGAATCTTCAAGGGCAAAAGCAAGGTCTCGGAGTGAACCAAAACAACGACCCAAACAGGGAATGAAGCACAAAAGCAAGTTTGTAGAATCTCCATTGCATGGTCCAAGGCAAAACCTGTTCTCAAACTCATCACGGTTCGATCATGGAAGCCTGGACCATTGGGTTATTAATCTTCATGGATCAATGAAGGAAAGCAAGCGTGATTCTTTTGGCAGCAGCACGATGACCAGTGATTCCTACTACTGA 1131 0.4271 MGKAGKWIRNLLLGKKEEKFKKIDAFCPENKTATKVKRRWSFGKLAGGRITGKVAENHKFSRSFDSGDSAKLQIQVLLETKNPRYLPTSLAKVYEDTEFETAAATRIQAAFRSYLARKALHALRGLVKIQALVRGHLVRKQTTATLRGMHALMAIQVRARIQRIQMVEEANLLGKQAPQHKEIPHMKGLISEENQDSEDMSLKDILGVLKSRSGPLDGSHVKSRKYDSMAFYSKHLSSSKRENQHKQNTLVTAPNSPAHYRDMSEFNPTTMALSTSQRHLVPHRQSWSPNYMNKTESSRAKARSRSEPKQRPKQGMKHKSKFVESPLHGPRQNLFSNSSRFDHGSLDHWVINLHGSMKESKRDSFGSSTMTSDSYY 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00050 376 Gene3D - 99 153 - -
Sebi606g00050 376 Pfam IQ calmodulin-binding motif 127 141 IPR000048 GO:0005515
Sebi606g00050 376 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Sebi606g00050 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 142 IPR027417 -
Sebi606g00050 376 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Sebi606g00050 376 Pfam Protein of unknown function (DUF4005) 256 319 IPR025064 -
Sebi606g00050 376 MobiDBLite consensus disorder prediction 298 325 - -
Sebi606g00050 376 MobiDBLite consensus disorder prediction 273 297 - -
Sebi606g00050 376 MobiDBLite consensus disorder prediction 273 339 - -
Sebi606g00050 376 MobiDBLite consensus disorder prediction 236 255 - -
Sebi606g00050 376 PANTHER IQ-DOMAIN 5-RELATED 1 333 - -
Sebi606g00050 376 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Sebi606g00050 376 MobiDBLite consensus disorder prediction 236 258 - -
Sebi606g00050 376 SMART iq_5 122 143 IPR000048 GO:0005515
Sebi606g00050 376 SMART iq_5 99 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00050 Sebi-Chr606 426260 427741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00050 1 345 IQD Protein Family AT4G14750 35.311 1.81e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00050 - - gmx:100781320 516.153