Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00044 ATGTCGAGTTCAAGGGTAACCCCGCACTCAACACTAACGGCCGTTTCCAGTAAACCCGTTAGGTCGGGTAAGACCCATACCCTATCGGCGTTGGATCATGCCATGGGTTTTCATACCCTTCACATAATATTCTACTACAAGAATGAGGGTAACAACTTGTTTGAGTCCTTTGATTTGGACCCGTTGAGGGAATCATTGTCTGAGGTTCTTACAATGTACCCGACTATGACGGGTCGGTTAGCCCGAGGGGTGGATGGTAACTGGGAAGTGAGGTGCAATGATGCGGGTGTTCGGGTCATAATGGCAAATGTGGATACCACACTCAAGGAGTGGCTCTCATCTGCTTCTGGATGCGAAGAGGAACATCTAATTGCTTGGGATGAAATGCCTCATGACCCTAACACATGGTCACCCTTTCGAATTCAGATAAACAGCTTCAAAGAAGGAGGTGTTGCAATAGGACTAAGTTGTAGCCACATGCTTGCTGATCTAACTTGTGCTGCATCATTCTTCAAATCATGGACAGAAACTCACTGCCACTTACCTATTACCCACCCTCCTTCCTTCACTCCAATTTGTGCTTCACCACTTCCAAACTCGGATACAGTGTCTCTCCCTCTCTATGCAACAAAAGCACAAATAATGGCCACAGGCACTTTCAAATTTTCCAGTTCAATTATGAAGCAATGCCTCTCCAAAGTCCATGACACATGCCCCAATGCCACCCCATTTGATTTCCTCTCTGCTCTGTTTTGGACTCGCATTGCTCGCTTGAAGCCCCCAAAAAATCAGAACCAAACTCACTCTCTATCAATCTGCACTGACTTCAGGAGACTCATGAAACCACCCCTCCCAATTGGGTATTTCGGAAATGCGTTACATTTTTCAATGATTTCAGTAAAAGTGGAAGACATAGAGAGTGATCAATTAGGAGGCATAGCTAGTAAAGTGCATGACCACTTGGTAGGGCTAGTAGAGGAAGAAATAAGGTCTGCTATGGAATGGTTAGAGTCAGAAAAGGAAAGAGAGGGAGGGAAATTCAGATATGGGAGTGAGTTAACTTGTGTTTGCATGGAGCACATGGTGATTTCTTCTGAACAGTCATTGCTATATTCAGCAATGTTTAGCAGTAATGAGAAGCCAGAACATGTGTCATGTCATGTGGGGAATGTGGATAGTGAAGGGTTGATTATGGTGATGCCTTCCTCAGAAGAAGGACTTGCAAGAACGGTGATGGTGACGCTGCCACAGGAAGAATTAGCTAAAGTAAGCAAGGATCAAGCAATATTGCAGCTGGAGCCAACAATGATCCTTGCTGGTTGTGGGGTTGAGGAAAATCATTGA 1344 0.4501 MSSSRVTPHSTLTAVSSKPVRSGKTHTLSALDHAMGFHTLHIIFYYKNEGNNLFESFDLDPLRESLSEVLTMYPTMTGRLARGVDGNWEVRCNDAGVRVIMANVDTTLKEWLSSASGCEEEHLIAWDEMPHDPNTWSPFRIQINSFKEGGVAIGLSCSHMLADLTCAASFFKSWTETHCHLPITHPPSFTPICASPLPNSDTVSLPLYATKAQIMATGTFKFSSSIMKQCLSKVHDTCPNATPFDFLSALFWTRIARLKPPKNQNQTHSLSICTDFRRLMKPPLPIGYFGNALHFSMISVKVEDIESDQLGGIASKVHDHLVGLVEEEIRSAMEWLESEKEREGGKFRYGSELTCVCMEHMVISSEQSLLYSAMFSSNEKPEHVSCHVGNVDSEGLIMVMPSSEEGLARTVMVTLPQEELAKVSKDQAILQLEPTMILAGCGVEENH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00044 447 Gene3D - 1 205 IPR023213 -
Sebi606g00044 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 417 - -
Sebi606g00044 447 MobiDBLite consensus disorder prediction 1 20 - -
Sebi606g00044 447 SUPERFAMILY CoA-dependent acyltransferases 27 187 - -
Sebi606g00044 447 Gene3D - 206 425 IPR023213 -
Sebi606g00044 447 Pfam Transferase family 6 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00044 Sebi-Chr606 394026 396646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00044 37 425 Monolignol Biosynthesis Gene Families AT5G48930 24.755 4.78e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00044 - - lja:Lj1g3v4958860.1 638.262