Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00033 ATGGAGCTTCCTCCGAATCTGTTGACGGACGAGGCGAGTCCTGAGTGGATGAACAAAGGGGACAACGCATGGCAACTAACGGCAGCCACATTGGTGGGCCTCCAAAGCATTCCTGGGCTTGTCATTCTCTATGGAAGCCTTGTTAAAAAGACATGGGCCATTAACTCTGCTTTCATGGCCTTCTATGCCTTCGCTGCCGTTCTCCTTTGCTGGGTTGCGTGGGCTTTCCGCATGTCATTCGGCGACAAATTGGCCTTCTTTTTGGGGAAACCCGGCGTTGCATTGGATGAGAAATTCCTTTTAGGGCAGGCTTTTTTGGGGCTCTTTCCTACTGCTACCATGGTCTTTTTTCAAGGTGTGTTTGCAGGGATCACTTTGATTTTAATAGCAGGTGCGTTATTGGGGAGAATGAATATTCGTGCGTGGATGCTGTTTGTGCCACTTTGGGTTACTTTCTCATACAGTGTCACTGCCTTCAGCATTTGGTGCCCCGATGGATGGTTGGCAAAGCTTGGGGTTATTGATTTTGCTGGGGGTTATGTTATTCACCTCTCTGCAGGAGTTGCTGGTGTCACTGCAGCTTACTGGGTAGGTCCACGATCAGAGAAAGACAGAGAAAATTTTGCATCAAACAACATGATAGTGGTGCTTGCAGGCGCAGGCCTGCTTTGGATGGGTTGGAGTGGATTCAACGGTGGAGCTCCGTTCGTGGCCAGCACAGTGGCATCTCTTGCTGTCCTAAACACACACGTGTGTACTTCCGCTAGCATCGTCGTTTGGGTCCTACTCGATACTTTCTGCTTCGGCAAACCTACAGTGTTCGGTGCCGTACAAGGCATGATCACTGGAGTTGTGCAGGGGTGGGCAGCGATTTTGATGGGTTTGATATCAGGAAGTGTTCCATGGTACACAATGATGGTACTCCACAATAAGGTTCCTTTCTTAAAGCAAATAGATGACCCCATGGCGGTGTTTCACACGCACGCCATCGCGGGTGCTCTTGGCGGCATTCTCACTGGCTTCTTTGCTGTGCCTAAACTGTGCCGTCTCTTCTACATGGTTCCCGATTGGGAAAAATACATTGGCCTCTTCTATGGCCTCCAGAATGGTGCCACTCATGCGGGTTTAAGACAGATGGCAATCCAAGTTGGAGCCATTGCTTTTGTGATTTGCTTCAATTTTGTTATGACCAGCTTGATTTGCTTGCTTGTGGGTCTCATAGTACCACTTAGGCTTAATACTGATGCATTGCAAATGGGTGACAAGGCAATACATGGAGAGGAGGCTTTTGCTTTGCATGGTGAGACTACAAAATTTGAGAACCTGAAGCACAATAAGATTTTTGATACTCAAGATTTTTCATTCGTTAAGGAGTCAAGGTCATTAGGTCAGCTTCAAATGGTATGA 1407 0.4783 MELPPNLLTDEASPEWMNKGDNAWQLTAATLVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFAAVLLCWVAWAFRMSFGDKLAFFLGKPGVALDEKFLLGQAFLGLFPTATMVFFQGVFAGITLILIAGALLGRMNIRAWMLFVPLWVTFSYSVTAFSIWCPDGWLAKLGVIDFAGGYVIHLSAGVAGVTAAYWVGPRSEKDRENFASNNMIVVLAGAGLLWMGWSGFNGGAPFVASTVASLAVLNTHVCTSASIVVWVLLDTFCFGKPTVFGAVQGMITGVVQGWAAILMGLISGSVPWYTMMVLHNKVPFLKQIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLFYGLQNGATHAGLRQMAIQVGAIAFVICFNFVMTSLICLLVGLIVPLRLNTDALQMGDKAIHGEEAFALHGETTKFENLKHNKIFDTQDFSFVKESRSLGQLQMV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00033 468 Pfam Ammonium Transporter Family 23 429 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sebi606g00033 468 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Sebi606g00033 468 PANTHER AMMONIUM TRANSPORTER MEP2 6 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sebi606g00033 468 SUPERFAMILY Ammonium transporter 16 412 - -
Sebi606g00033 468 Gene3D Ammonium transporter AmtB like domains 6 448 IPR029020 -
Sebi606g00033 468 PRINTS Rhesus blood group protein signature 245 267 IPR002229 GO:0005886
Sebi606g00033 468 PRINTS Rhesus blood group protein signature 214 232 IPR002229 GO:0005886
Sebi606g00033 468 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00033 Sebi-Chr606 319586 321958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00033 112 462 Inorganic Solute Cotransporters AT2G38290 50.549 4.88e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00033 K03320 - gmx:100782944 824.698