Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00029 ATGGAAAGGGTTTTCTCGGTGGATGAGATATCGGAGGAGTGTTGGTCGGCGGCGAGGGATGAATCATCGTGTAAGTCAAAGTCAAAGATGAATCGAAGCGCTTCGGAATGGGCCTTTCAGCAGTTTCTAAAAGAAGCTTCATCTTCCTCTGTTGATGATGTCAAAATCAAAAAGGATCCAACCACCACAGCCACAGCCACAACACCTCTTGATTCTGAAGACTACCAAGCTATTCTCAAGACCAAGCTCAATCTCGCTTGCGCCGCCGTCGCTTTGACTCGGGGAACTTTGGTCAAAACTCAAGATCCTGCCACTCTTCCTGACAGTGGATCACAGGCATCTAATCCTTCTGAAGTTGGATCTCGGGCTACTTTAAAAGAATCCGGCTCTTCTGAAAATGATCCATCTAAACTACAAAATAAAGATGTCAAAGTACCAGTTGGGGTTCCTTCCATGCAGAGGAAACCTGCTATTGCAGTGAGGTCAACAACAAGTGGATCATCAAAAGAACAGTCAGATGACGAGGAAGCTGAGGGAGAGATTAATATGACTGGAAACATGAACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCTGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTTGAGACACAAGTATCTCAATTAAGAGGTGAAAATTCTTCACTGATGAAGCGCTTGACGGATGTGAGCCAGAAATACAATGATGCTGCTGTTGACAACAGAGTATTGAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAAATGGCTGAAGAGACTGTCAAAAGAATTACTGGGTTGAACCCAATGTTTAATGCCATGAGTGAGATATCATCAATGGGAATGCCATTATATGATGGAAGCCCTTCTGAGGCATCAGCTGATGCATCTGTTCCTGTACAAGAAGACCCAAAACATCACTATTGTCAACCAACTTCTAATAATGGTATGTCCAGTCAAGATCTGAGAGTCAACCATGGCATTTCTTCAGTTGAAAATGTGCAGCAGAACAATGCAACAGTGGTCGGTGGGAACAAGATGGGGAGAACAAGCTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGCGGTGGTGCAGATTCATGTGGACCTTCTCCTAATGAAGACCAATAA 1179 0.4461 MERVFSVDEISEECWSAARDESSCKSKSKMNRSASEWAFQQFLKEASSSSVDDVKIKKDPTTTATATTPLDSEDYQAILKTKLNLACAAVALTRGTLVKTQDPATLPDSGSQASNPSEVGSRATLKESGSSENDPSKLQNKDVKVPVGVPSMQRKPAIAVRSTTSGSSKEQSDDEEAEGEINMTGNMNPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLMKRLTDVSQKYNDAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFNAMSEISSMGMPLYDGSPSEASADASVPVQEDPKHHYCQPTSNNGMSSQDLRVNHGISSVENVQQNNATVVGGNKMGRTSSLQRVASLEHLQKRIRGGADSCGPSPNEDQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00029 392 PANTHER BASIC LEUCINE ZIPPER 63 1 381 - -
Sebi606g00029 392 FunFam BZIP transcription factor 191 242 - -
Sebi606g00029 392 Coils Coil 251 271 - -
Sebi606g00029 392 Gene3D - 192 246 - -
Sebi606g00029 392 MobiDBLite consensus disorder prediction 101 188 - -
Sebi606g00029 392 Coils Coil 202 236 - -
Sebi606g00029 392 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 196 211 IPR004827 GO:0003700|GO:0006355
Sebi606g00029 392 SUPERFAMILY Leucine zipper domain 193 243 IPR046347 GO:0003700|GO:0006355
Sebi606g00029 392 Pfam bZIP transcription factor 192 244 IPR004827 GO:0003700|GO:0006355
Sebi606g00029 392 SMART brlzneu 189 253 IPR004827 GO:0003700|GO:0006355
Sebi606g00029 392 Pfam Basic leucine-zipper C terminal 260 381 IPR020983 -
Sebi606g00029 392 MobiDBLite consensus disorder prediction 101 136 - -
Sebi606g00029 392 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 191 245 IPR004827 GO:0003700|GO:0006355
Sebi606g00029 392 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00029 Sebi-Chr606 293720 297535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00029 1 282 bZIP Transcription Factor Family AT4G02640 39.450 8.57e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi606g00029 bZIP_C 1.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00029 K25784 - gmx:778137 503.056