Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00022 ATGAGAAGCTTTCAGATGAGGAGATGGATTGCTGTCCAGTATGCAATATTGATCTGGGCTGCCTTCCAGTGGAAAAACTCAGGAAAGAGAACAAAAACTGGTACAAGAAAGGCTTCTGCTTTACGTGGATGCAATTTTATCCTTGAAGAATCCATAAAGACAGAGGAAACACATGGTGAAGATAATCTGGACTCTTCCATAGCTGAGCCTTCTAAGAAGCATAGGCCCAATGAAGATACAGAGAACAGTATGGACCTTACAGAAGGGAAGGCTGATCTATGGACGCCCTTGAACTGTCTTGTTGAAGTAGCCAATAGAACAAAGGCCTCCAGGTCAAATTCACATGGGACCTCTCTTGCCAAATTAGAGTCTCCAACTACTCATGGTGGACAAGAGATGTCTGAAATTGTAACCAAATCAGAGCTTCCTACTTCTGTCCACAGTGGATTACACATGCCCAAAACCAAAAACAAAGATAATGGACATAAAACAAAGGTTGGAGGTGACAAGGATGGAAACACCTTGCCTTTAGGACCAGTGAAGCGAAGAAGGCTGCGTCCTGCTGGTCAGAAAAGAGTAACAGCATCCCAGATGTCTGCCTCAGCCCAAGTCATGTTAGATGCAAAAAGGAGCAGATGCAACCGGAAAAACCGTCCTATTTGGTTTTCATTAGTTGCTTCAAAAGACCAGAAAGTAGATGTTCCCTTGCCACAGATTTCAACATGTTATTTAAGAATAAAGGATGGTACTATGCCCGTGTCATTTATTCAAAAGTACCTCATGCAAAAACTTAATCTTGCCAGCGAAGCAGAGGTGGAAATAATGTGTCGGGGTCAACCTGTGCTCCCATCTTTGCAACTGCATAACTTAGTAGATTTGTGGTTCTGTACAGCATCAACCTCAAAAAAGATACCGGCATCTTGGCGCTCTGCTAAGGACTTTGTGATGAGCGGAGGACCTGATACGGAAGTGACGCTGACATGGGAGGATCAGCAGAACATCAACACATTCGGAAGATTGAATAATCGCCTTCACGAGCTTGACGATGACATCAAAATCGCTAAGGAAACAAATGACAACTTGGAGGACGCAAGCAATGAATTGATTCTCTCAGATGAAGAGGTAGTTCGGTTTCAGATAGGGGAGGTTTTTTCTCATGTGTCAAGGGATGAAGTTGAGAGCAGGTTAGAACAAATGAAAGAGGTAACAAGCCAGAAATTGGAAAAGCTTGAAGAGGAGAAAAAATCTGTGGTTGCTCAGATGGCTGAACTGAAGAAAATTTTGTACGGGAAGTTCAAGGACTCCATCAATCTTGAGGAGGATTAA 1326 0.4306 MRSFQMRRWIAVQYAILIWAAFQWKNSGKRTKTGTRKASALRGCNFILEESIKTEETHGEDNLDSSIAEPSKKHRPNEDTENSMDLTEGKADLWTPLNCLVEVANRTKASRSNSHGTSLAKLESPTTHGGQEMSEIVTKSELPTSVHSGLHMPKTKNKDNGHKTKVGGDKDGNTLPLGPVKRRRLRPAGQKRVTASQMSASAQVMLDAKRSRCNRKNRPIWFSLVASKDQKVDVPLPQISTCYLRIKDGTMPVSFIQKYLMQKLNLASEAEVEIMCRGQPVLPSLQLHNLVDLWFCTASTSKKIPASWRSAKDFVMSGGPDTEVTLTWEDQQNINTFGRLNNRLHELDDDIKIAKETNDNLEDASNELILSDEEVVRFQIGEVFSHVSRDEVESRLEQMKEVTSQKLEKLEEEKKSVVAQMAELKKILYGKFKDSINLEED 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00022 441 MobiDBLite consensus disorder prediction 55 86 - -
Sebi606g00022 441 FunFam Prefoldin subunit 4 324 434 - -
Sebi606g00022 441 MobiDBLite consensus disorder prediction 108 199 - -
Sebi606g00022 441 Coils Coil 337 374 - -
Sebi606g00022 441 Gene3D - 199 305 - -
Sebi606g00022 441 SUPERFAMILY Prefoldin 331 428 - -
Sebi606g00022 441 MobiDBLite consensus disorder prediction 108 145 - -
Sebi606g00022 441 MobiDBLite consensus disorder prediction 152 169 - -
Sebi606g00022 441 Coils Coil 393 427 - -
Sebi606g00022 441 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 26 316 IPR044807 GO:0004842
Sebi606g00022 441 Pfam Prefoldin subunit 331 434 IPR002777 GO:0006457|GO:0016272|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00022 Sebi-Chr606 215564 221864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00022 180 316 C3H Transcription Factor Family AT3G23060 36.232 1.22e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00022 K16277 - gmx:100783999 438.343